Gene Spro_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2920 
Symbol 
ID5603347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3214446 
End bp3215546 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content58% 
IMG OID640938461 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_001479149 
Protein GI157371160 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGC AAAACGATCC TGGCCGATCC AAATCCCGCC ACACTGAGTA TTCCCTGTTG 
CTCCCTATCG CCGCCCTGGT GGTGCTGAAT CTGTGGGGCA CTACCAGCAA CTTTCCGCTG
ATCGTCGGCA TTAACATCGT TGCCTTGATC GGTATTCTCA GCAGCGCGTT CAGCGTAGTG
CGCCACGCCG ACGTTCTGGC CCACCGCCTG GGTGAACCCT ATGGCTCGCT GATCCTCAGC
CTGTCGGTGG TGATCCTGGA AGTCAGCCTG ATTTCAGCGC TGATGGCCAC CGGCGACGCC
GCGCCGGCGC TGATGCGCGA TACGCTTTAC TCGATCATTA TGATTGTCAG CGCGGGGCTG
GTCGGCGTTG CGCTGCTGCT TGGCGGCCGT AAATTCGCTA CCCAGTACGT AAACCTGGGC
GGCATAAAAC AGTATCTGAT GGCGATTTTC CCACTGGCGG TGATTGTGCT GGTGTTCCCG
AGTGCGCTGC CCGGCGGTAA CTTCACTACC GGTCAGGCAC TGCTGGTTTC GGTGATATCT
GCCGCCATGT ACGGCGTGTT CCTGGTGATC CAGACCAAAA CTCACCAGAG CCTGTTCGTC
TATGAGCACG AAGATGACGA TGGCGATCCG CACCATGGCA AGCCTTCCTC GCACAGCAGT
GCCTGGCATG CTGTTTGGCT GATCGTGCAT CTGGTTGCGG TGATCGCGGT AACCAAGTTT
AACGCCAATC CGCTGGAAGG TTTGTTGACC AAGGTAAATG CCCCGGCGCA ATTTACCGGC
TTCCTGGTCG CTCTGCTGAT CCTGTCGCCT GAAGGTCTGG GGGCACTGCG TGCGGTATTG
AATAATCAGG TACAGCGCGC CATGAACCTG TTCTTCGGCT CGGTGCTGGC GACCATTTCC
CTGACGGTAC CGGCGGTCAC CGTCATCGCC ACGCTGACCG GTCAGACGTT GATCTTCGGT
TTGCAGACGC CACATATCGT GGTAATGCTG ACGGTGTTGC TGCTGTGCCA GCTTTCGTTC
TCCACCGGCA GAACCAACGT GCTGAACGGG ACTGCGCACC TGGCACTGTT CGCCGCCTAT
ATGATGACTA TCTTTGCCTG A
 
Protein sequence
MKSQNDPGRS KSRHTEYSLL LPIAALVVLN LWGTTSNFPL IVGINIVALI GILSSAFSVV 
RHADVLAHRL GEPYGSLILS LSVVILEVSL ISALMATGDA APALMRDTLY SIIMIVSAGL
VGVALLLGGR KFATQYVNLG GIKQYLMAIF PLAVIVLVFP SALPGGNFTT GQALLVSVIS
AAMYGVFLVI QTKTHQSLFV YEHEDDDGDP HHGKPSSHSS AWHAVWLIVH LVAVIAVTKF
NANPLEGLLT KVNAPAQFTG FLVALLILSP EGLGALRAVL NNQVQRAMNL FFGSVLATIS
LTVPAVTVIA TLTGQTLIFG LQTPHIVVML TVLLLCQLSF STGRTNVLNG TAHLALFAAY
MMTIFA