Gene Spro_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2899 
Symbol 
ID5603314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3185676 
End bp3187460 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content57% 
IMG OID640938440 
Productnitrate/nitrite sensor protein NarX 
Protein accessionYP_001479128 
Protein GI157371139 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TGTTAGCACC ACTTTCCATC GTGAATCAGG TGGCCGTCCT GATGTTGCTG 
CTGGGGATAC TGGGCGTGGC CGGTATGAGC ATTTCAGCCT GGATGTCGCA AAGCATTCAG
GGCAACGCGC ATGCCATCAA CAAAGCCGGT TCGCTGCGAA TGCAAAGTTA TCGTCTGCTG
GCTCAGGTGC CGCTGAATTC ACACAGCGAA GCACTGATCC GTGAGCTGGA TCAGGACGCC
AACAGTCCCG ATCTTCAGCG TTCAGTGACA CAAGAGCAAC TGACCGAACA GTTTCAGGCG
CTGAATAATT ACTGGCAAGA AACCCTGCTG CCAAGGTTGC GGGCAGCCCG GCAACCGGCG
GAGGCAACCC CGCAGGTGGT ACATTTCGTT TCCCTGCTCG ATACGCTGGT CTCGGATATT
GACCACCATA CCGAGCGGCG CCTGCTGACG GTGACGCTGG TACAGGCGGT GTTTATCGCG
CTGACGCTGC TGCTGCTGGT GGGAACTATC TGTTACCTGC GCCGTCGTCT GCTGCATCCG
TGGCGTCAAT TGGTGGCGAT GGCGCTGTCA GCGGGTCGCG GCGATTTCAG CCGCCGTTTT
GCCCAGCGTG GCCATCAGGA TGAAATGGCC TCACTCGGCG GCGCGTTGAA CACCATGTCC
GACGAATTGG CTACCATGTA CAACGGGCTG GAGCAGCGGG TGGCAGAAAA AACCGCCGAT
CTGCAGCAAA AGAATCAGGT GCTGGGCTTT TTGTATCACG CCAGCCGTCA GTTGCATGCC
AACGAACCAT TGTGCAGCCG CCTGACACCG ATCCTCAATC AGTTGCAAAC CCTGACGCCA
CTGCGCGCCA TCCAGGTACG CCTGTACGAA AACAACAGTC AGGAACAGTT TGTACAGCTG
TGCGGCAACC AGCCGTTGCG GCCGGAATAT TGCAATAATC CGGTGTGCAG CGCCTGCCTG
AGCGACGACA ATCAGCAACA TGCCGATCAT CCTTCGCTGA GCTGGAGCCT GAGTGACAAA
CTTGGAGATT ACGGGGTGAT CGTTGCGCAA CATGCGCCAC AGCGCCCGCT GAATGACGAA
GATCGGCAGT TGATCAGTAC CCTGGTCGAA CAGTTGACCA GCGTGCTGGC GATTGAACGC
CAGGTGGATC ATCAACAGCA GTTGATGCTG ATGGAAGAAC GCGCGGCGAT AGCCCGTGAG
TTGCATGACT CTATTGCCCA ATCATTATCG TGCCTGAAGA TGCAAACCAG TTGCCTGCAA
ATGCAGGGGG CCGAACTTTC ACCCGCCAAC CTGGCGCTGG TACAACAGAT GCGCGAAGAG
TTAAACATCG CCTACCGCCA GTTGCGTGAA CTCTTGACCA CCTTCCGCCT GCGGCTGACA
GAGCCAGGAC TGCTGGCAGC CTTGCAGTCG ACGGTGCAGG AGTTTAGTCA ACGGCTCGGC
ATTTCCATCC AGCTCGACTA TCAGTTAACG CCGCGTACGG TGCCCGCTTA TCAGGCTATC
CACCTGCTGC AAATTGCCCG CGAAGCGTTA AGCAACATCA ACAAACATGC TCAGGCCAGC
CAGGTGAGCA TTCAGGTAGT CAATCAACGA GGCGAGGTCA CACTGAGCGT CTGCGATAAC
GGCTGCGGAT TGCCGCCAGA CACCGATCGC CCCGATCACT ACGGCCTGAT AATTATGCGC
GATCGCGCCA AAAGCCTGCA CGGCCGCTGC GAGATTTTAC CCCGCAGCGG CGGCGGCACT
GAGGTCCGGG TGGTATTTAA ACCGGACAAC CACGCCATCG ACTAA
 
Protein sequence
MKRLLAPLSI VNQVAVLMLL LGILGVAGMS ISAWMSQSIQ GNAHAINKAG SLRMQSYRLL 
AQVPLNSHSE ALIRELDQDA NSPDLQRSVT QEQLTEQFQA LNNYWQETLL PRLRAARQPA
EATPQVVHFV SLLDTLVSDI DHHTERRLLT VTLVQAVFIA LTLLLLVGTI CYLRRRLLHP
WRQLVAMALS AGRGDFSRRF AQRGHQDEMA SLGGALNTMS DELATMYNGL EQRVAEKTAD
LQQKNQVLGF LYHASRQLHA NEPLCSRLTP ILNQLQTLTP LRAIQVRLYE NNSQEQFVQL
CGNQPLRPEY CNNPVCSACL SDDNQQHADH PSLSWSLSDK LGDYGVIVAQ HAPQRPLNDE
DRQLISTLVE QLTSVLAIER QVDHQQQLML MEERAAIARE LHDSIAQSLS CLKMQTSCLQ
MQGAELSPAN LALVQQMREE LNIAYRQLRE LLTTFRLRLT EPGLLAALQS TVQEFSQRLG
ISIQLDYQLT PRTVPAYQAI HLLQIAREAL SNINKHAQAS QVSIQVVNQR GEVTLSVCDN
GCGLPPDTDR PDHYGLIIMR DRAKSLHGRC EILPRSGGGT EVRVVFKPDN HAID