Gene Spro_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2876 
Symbol 
ID5603274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3156824 
End bp3157339 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID640938417 
Productfimbrial protein 
Protein accessionYP_001479105 
Protein GI157371116 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA TTATGCGCCA CCCGGCGTTA TGGATATTGT GCAGTGGTTT AGGCGCCAAC 
GGTTTGGCTC AGGCCGACGC AGTCACGGTC AATATCACCA GCAATGTGAT CGCCGCCCCT
TGTGTCATTG ATGGTGCCGG CTCTCTGGAT ATTAAACTGG ATGATATCGT GGTCAGCAAA
TTGCAAAAGT CCGGCGATAC TGGCCCTTTC AAAAGTTTCG ATTTAAAGCT GAAGGACTGC
CCAGCTGCGA CCACCAAGGT CACGGCCAGC TACACTGGCA CGGCATCCCC TTTATCCGCA
AACAGCTTTA TAAATACGGG TACGGCAAGT CAACTGGTTC TGTACCTTCA AGATAGCGCC
AGTAAAGAAA TCGCTCCTAA TACCACCCGC CAGGTAGACG TGAACAGCAC TTCCAAAACA
GCGGTATTTA GTCAAAAGGT GCAGATTTAT GCGAAAGGTT TGGCCACTGC CGGCACGGTA
ATTGGCAACA TTGTTGTGTC CTTTACCTAT CAATAA
 
Protein sequence
MLRIMRHPAL WILCSGLGAN GLAQADAVTV NITSNVIAAP CVIDGAGSLD IKLDDIVVSK 
LQKSGDTGPF KSFDLKLKDC PAATTKVTAS YTGTASPLSA NSFINTGTAS QLVLYLQDSA
SKEIAPNTTR QVDVNSTSKT AVFSQKVQIY AKGLATAGTV IGNIVVSFTY Q