Gene Spro_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2854 
Symbol 
ID5603217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3132820 
End bp3133806 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID640938395 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001479083 
Protein GI157371094 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.148039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CACTGCTGGC TTTTAATCAA CTGTCGGTGG CCTTCAATGG CGAGCAGGGC 
CGGGTGCAGG CGGTGCAGCA ACTGAGTTTT GAACTGCATG CCGGACAGAC GCTGGGAGTG
GTCGGCGAGT CCGGCTGTGG TAAAAGCGTC ACTGCCATGG CGCTGATGGG GCTGTTACCG
CAGCCGCTGG CGCAGATTGA CGGCGGCGAA ATCCATTTTG ACGGGCAAGA TTTATTGAAA
CTGCGACCGC AGCAGATGGC CGATCTGCGC GGTAACCGGC TGGCGATGAT TTTCCAGGAA
CCAATGAGCG CCCTGAACCC GGTGCTGACC ATCGGCGAAC AGCTGGTGGA ACCGCTGATC
CGTCATCGCG GTACTTCGCC GAAGGCGGCC TGGCACGAGG CGACGGCGCT GATTACCGAG
GTGGGGTTGG CGCGTGCGGA GCAGTTGATG ACCAGCTACC CGCACCAGCT CTCCGGCGGC
ATGTTGCAGC GTATTATGAT TGCCATGGCC ATCAGCTGCC GTCCGGCCCT GTTGATTGCC
GATGAGCCGA CCACCGCGCT GGACGTCACC GTACAGGCGC AGATCCTGGC ACTGCTGCGT
GAACAGACCC GCAAAAATAA TATGGCGATG ATGCTGATCA CCCACGACCT TGGCGTGATT
GCCCAGATGG CCGACCGGCT GGTGGTGATG TACGCCGGAC GGATAGTCGA GCAGGGGGCA
ACGCGTGAAG TGCTGGCTAA CCCGCTTCAT CCTTATACTC AGGGGCTGAT GGCTTCGCGG
CCGGTGGCCG GGCAGCGGCG ACGCAGATTG TATTCGATCC CCGGTCAGGT ACCTGATTTG
GCTAAACTGC CCGACCATTG CGCCTTCGCC GATCGTTGCG CTCAGGCCAG TGCGCGCTGT
CGCGACGGCA TCCCGCCGTT GTATGGCCCA TTGCAGCGCC AGTCGGCCTG TTTTCTGAAT
GCCGGAGGGC GTATTCATGT CGGCTGA
 
Protein sequence
MSRPLLAFNQ LSVAFNGEQG RVQAVQQLSF ELHAGQTLGV VGESGCGKSV TAMALMGLLP 
QPLAQIDGGE IHFDGQDLLK LRPQQMADLR GNRLAMIFQE PMSALNPVLT IGEQLVEPLI
RHRGTSPKAA WHEATALITE VGLARAEQLM TSYPHQLSGG MLQRIMIAMA ISCRPALLIA
DEPTTALDVT VQAQILALLR EQTRKNNMAM MLITHDLGVI AQMADRLVVM YAGRIVEQGA
TREVLANPLH PYTQGLMASR PVAGQRRRRL YSIPGQVPDL AKLPDHCAFA DRCAQASARC
RDGIPPLYGP LQRQSACFLN AGGRIHVG