Gene Spro_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2779 
Symbol 
ID5603994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3059238 
End bp3059981 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID640938320 
Producthypothetical protein 
Protein accessionYP_001479008 
Protein GI157371019 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0375824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0326422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC ATAGTAAGTG GGCCAACACC AAGCACCGCA AGGCAGCGCA GGATTCCAAG 
CGCGGTAAAA TTTTCACCAA AATTATTCGT GAGCTGGTGA CCGCCGCGAA ACTGGGCGGT
GGCGATCCGG GGGCTAACCC GCGTCTGCGT GCGGCGATCG ACAAGGCGCT GTCCAACAAC
ATGACGCGCG ATACCCTGAA CCGTGCCATC GCGCGTGGTG TGGGCGGTGA CGATGATTCC
AACATGGAAA CCATCATTTA TGAAGGCTAC GGCCCGGGCG GTACTGCCGT CATGATCGAA
TGCCTGAGTG ATAACCGTAA CCGTACCGTG GCCGAAGTGC GTCATGCCTT CACCAAATGT
GGCGGTAACC TGGGTACTGA TGGCTCCGTG GCTTACCTGT TCACCAAGAA GGGCGTTATC
ACTTACGCAC CGGGCCTGGA TGAAGACGTG GTGATGGAAG CGGCGCTGGA AGCCGGTGCT
GAAGATATCG TCAGCTACGA TGACGGCGTG ATTGACGTAT TCACCGCCTG GGAAAACCTC
GGCGAAGTGA AAGACGCTCT GACCGCAGCC GGTTTCACCG CCGACTCGGC GGAAGTTTCC
ATGATCCCAT CGACCAAGGC CGATATGGAT GAGGAAACCG CGCCCAAGCT GTTGCGCCTG
ATCGACATGC TGGAAGACTG TGACGACGTG CAGGAGGTTT ACCACAACGG TGAGATCTCC
GACGAAGTCG CGGCAACGCT GTAA
 
Protein sequence
MAGHSKWANT KHRKAAQDSK RGKIFTKIIR ELVTAAKLGG GDPGANPRLR AAIDKALSNN 
MTRDTLNRAI ARGVGGDDDS NMETIIYEGY GPGGTAVMIE CLSDNRNRTV AEVRHAFTKC
GGNLGTDGSV AYLFTKKGVI TYAPGLDEDV VMEAALEAGA EDIVSYDDGV IDVFTAWENL
GEVKDALTAA GFTADSAEVS MIPSTKADMD EETAPKLLRL IDMLEDCDDV QEVYHNGEIS
DEVAATL