| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2772 |
|---|
| Symbol | |
|---|
| ID | 5606690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3052762 |
|---|
| End bp | 3054084 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640938313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001479001 |
|---|
| Protein GI | 157371012 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000802583 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00694213 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCAGA TAGTCAAAAC TATCGCTCTG GCGTATAACA ACCTGCCACG GCCCCACCGC
GTCATGCTGG GGTCGTTGAC AGTGGTTACA TTGGCCGTTG CCGTCTGGCG GCCTTTTGTT
TATCACCCAG AACATAACCC CATCGTTAAG AGTATCGAAT TAGAATCCAG CCAGTTACGA
TCCTTGCTGC CAGAAGCCAG TGAGCCGATC GATCTTGACC AAGCCACCCC CGATGATGAC
ATCCCACAGG ATGAGCTGGA CCAGAAGGTC GCCGGCGAGG ATGGAGTGCA TGAATATGTC
GTTTCCACGG GTGACACCCT CGGCAGTATC CTGACCCAAT ATGGCATCGA TATGTCGGAC
GTCACGCTGT TGGCATCGCA GAACCGCGAT CTGCGTAATC TGAAAATTGG CCAACAGCTG
TCATGGACAG TGAACGATGC GGGCGATCTG CAGCGTTTGA CCTGGGAAGT GTCCCGCCGC
GAGACCCGTA CTTACGATCG TACGGGCAAC AGCTTCAAAG AAAGTCAGGA ATCTCAACAG
GGTGAATGGC GTAATAATGT GATCAGCGGC CGACTCAACG GCAGCTTTGT CACCAGCGCC
GCTAACGCCG GCCTGAGCCG TGCCGAAATC AATGCGGTGA TCAAGGCGCT GCAGTGGCAG
TTGGATTTCC GCAAACTGCG CAAGGGCGAT CAATTCTCGG TATTGATGTC CCGCGAACAC
TTTGATGGCA AGAGTGCGCA GAGCCAGTTG CTGGGTGTGC GTATGCGCAC CGGCGGTAAG
GACTACTACG CTATTCGTGC CGAAGACGGT AAATTCTACG ATCGTCAAGG TTCTGGTCTG
GCGAAAGGCT TTATGCGTTT CCCGACCATG AAGCAATTCC GCATTTCCTC AAACTTCAAC
CCACGCCGGG TTAACCCGGT CACCGGGCGC ATTGCGCCGC ATAAAGGCGT CGACTTCGCG
ATGCCGGTTG GCACCCCGGT GCTGGCCGTA GGTGACGGTG AAGTACTGAT CGCCAAACGC
AGTGGCGCTG CGGGTAACTA TGTGGCCATT CGTCATGGTC GCCAGTACAC CACGCGTTAT
ATGCATCTGA AAAAACTGTT GGTTAAGCCA GGTCAGAAAG TGAAGCGTGG TGATCGTATT
GCGTTGTCCG GTAACACCGG CCGCTCTACC GGCCCACATC TGCACTTTGA AATGTGGACC
AACCAACAGG CCGTGAACCC GTTGACGGCG AAACTGCCGC GCTCTGAAGG GTTGACCGGT
AAAGATCGCA GTGATTATCT GGCGCAGGTG AAGGAAGTCA CCCCGCAGCT GCAGTTGGAT
TAA
|
|---|
| Protein sequence | MQQIVKTIAL AYNNLPRPHR VMLGSLTVVT LAVAVWRPFV YHPEHNPIVK SIELESSQLR
SLLPEASEPI DLDQATPDDD IPQDELDQKV AGEDGVHEYV VSTGDTLGSI LTQYGIDMSD
VTLLASQNRD LRNLKIGQQL SWTVNDAGDL QRLTWEVSRR ETRTYDRTGN SFKESQESQQ
GEWRNNVISG RLNGSFVTSA ANAGLSRAEI NAVIKALQWQ LDFRKLRKGD QFSVLMSREH
FDGKSAQSQL LGVRMRTGGK DYYAIRAEDG KFYDRQGSGL AKGFMRFPTM KQFRISSNFN
PRRVNPVTGR IAPHKGVDFA MPVGTPVLAV GDGEVLIAKR SGAAGNYVAI RHGRQYTTRY
MHLKKLLVKP GQKVKRGDRI ALSGNTGRST GPHLHFEMWT NQQAVNPLTA KLPRSEGLTG
KDRSDYLAQV KEVTPQLQLD
|
|---|
| |