Gene Spro_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2749 
SymbolnhaB 
ID5607058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3029847 
End bp3031427 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content54% 
IMG OID640938290 
Productsodium/proton antiporter 
Protein accessionYP_001478978 
Protein GI157370989 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3067] Na+/H+ antiporter 
TIGRFAM ID[TIGR00774] Na+/H+ antiporter NhaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000080955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000221787 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACGA CCTTTCGCAG TGCCCTGGTG AAAAACTTCC TCGGGCAATC ACCAGACTGG 
TACAAACTGG CCATTCTGGT TTTCCTGGTG GTCAACCCAC TGGTTTTCTT CCTGGTCGAT
CCGTTCATTG CGGGTTGGCT GTTAGTAGTC GAATTTATCT TTACCCTGGC AATGGCGCTG
AAGTGCTACC CACTGCTGCC GGGTGGTCTG CTGGCCATTG AGTCAGTGCT GATCGGCATG
ACCAGCCCCG ATCGGGTGGG TGAGGAAATT GCCCATAATC TCGAAGTGCT GCTGCTGCTG
ATCTTTATGG TAGCCGGCAT CTACTTTATG AAGCAGTTGC TGCTGTTCGT TTTCACCAAG
CTACTGCTCA ACATCCGCTC AAAAATGCTG CTTTCTTTGG CATTCTGTTT TGCGGCGGCG
CTGCTGTCAG CCTTCCTCGA TGCATTGACG GTCGTTGCGG TGGTTATCAG CGTCGCTACC
GGATTTTATT CGATCTACCA CAACGTGGCT TCAAACCGTT CTGACGGTAA TGACGGTAAT
ATTGATGTCG GTGACGATAG CACCCTGGTC AGTGACGATC ACAAACAGAC GCTCGAGCAG
TTCCGCGCCT TCTTGCGCAG CCTGCTGATG CACGCAGGCG TCGGTACTGC GCTGGGCGGC
GTGATGACCA TGGTGGGTGA ACCGCAGAAC CTGATTATTG CCAAAAGCGC CGGCTGGGGA
TTTGTTGACT TCTTCCTGCG CATGGCGCCG GTTACCCTGC CGGTGTTTGC GTGCGGCCTG
CTGGTTTGCT TACTGCTCGA ACGCTTCGGC GTCTTCGGCT ACGGAGCAAA ACTGCCGGAA
CGCGTACGTG AGGTACTGAC CGAGTTTGAC CGCCAGGCTA CCGCCGGACG CAGTAAACAA
GAACAGGTCA GATTGGTCGT TCAGGCGCTA ATCGGCATTT GGTTGGTGGT GGCGCTGGCC
TTTCATCTGG CGGAAGTAGG CCTGATTGGT CTTTCGGTCA TTATTCTCGC CACTTCACTG
TGCGGCGTCA CCGATGAACA CGCCATCGGT AAGGCCTTCC AGGAGGCGCT GCCTTTTACC
GCGCTGCTGA CGGTATTTTT CACCGTGGTG GCAGTAATTA TTGAGCAACA CCTGTTTACA
CCGATTATTC ATTTTGTTCT GCAGGCGCAA CCCTCTTCAC AACTGGCGCT GTTTTATCTG
TTTAATGGCC TGCTGTCTTC GGTATCTGAC AACGTGTTCG TCGGTACGGT ATACATCAAT
GAAGCCCGTG CTGCATTTGA AAACGGTGTG ATTTCCCTGA AGCAGTTCGA AATGCTGGCG
GTCGCCATTA ATACCGGCAC CAATCTGCCA TCGGTCGCCA CGCCGAATGG TCAGGCGGCT
TTCCTGTTCC TGCTGACCTC TGCGCTGGCA CCGCTGGTGC GTTTGTCTTA CGGGCGGATG
GTATGGATGG CTTTACCCTA TACTGTGGTA TTAACCCTGG TGGGTCTGCT GTGCGTCCAG
TTTACACTGG CACCTGCGAC TGAGCTGCTG ACCCAGTGGC ATTGGCTGAC GCTGCCATCG
ATTGAAGCCG CTACACACTG A
 
Protein sequence
METTFRSALV KNFLGQSPDW YKLAILVFLV VNPLVFFLVD PFIAGWLLVV EFIFTLAMAL 
KCYPLLPGGL LAIESVLIGM TSPDRVGEEI AHNLEVLLLL IFMVAGIYFM KQLLLFVFTK
LLLNIRSKML LSLAFCFAAA LLSAFLDALT VVAVVISVAT GFYSIYHNVA SNRSDGNDGN
IDVGDDSTLV SDDHKQTLEQ FRAFLRSLLM HAGVGTALGG VMTMVGEPQN LIIAKSAGWG
FVDFFLRMAP VTLPVFACGL LVCLLLERFG VFGYGAKLPE RVREVLTEFD RQATAGRSKQ
EQVRLVVQAL IGIWLVVALA FHLAEVGLIG LSVIILATSL CGVTDEHAIG KAFQEALPFT
ALLTVFFTVV AVIIEQHLFT PIIHFVLQAQ PSSQLALFYL FNGLLSSVSD NVFVGTVYIN
EARAAFENGV ISLKQFEMLA VAINTGTNLP SVATPNGQAA FLFLLTSALA PLVRLSYGRM
VWMALPYTVV LTLVGLLCVQ FTLAPATELL TQWHWLTLPS IEAATH