Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2718 |
Symbol | |
ID | 5606740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2993439 |
End bp | 2995364 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640938259 |
Product | DNA topoisomerase III |
Protein accession | YP_001478947 |
Protein GI | 157370958 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.94815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00169428 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACTGT TTATTGCCGA GAAACCGAGT TTGGCGCGCG CCATTGCCGA CGTACTTCCC AAGCCGCATC GCCGCGGCGA CGGGTTTATC GCCTGCGGTA ACAATGATGT GGTGACCTGG TGTGTGGGCC ACTTGTTAGA ACAGGCGCAG CCGGATGCCT ACGACAGCCG TTATGCGCGC TGGTCGCTGG CCGATCTGCC GATCATCCCC GAAAAGTGGC AGTTGCAGCC ACGGCCTTCG GTCAGCAAAC AGCTTAATGC CATCAAAAAG CTGCTGCACG AGGCCGATGA AGTGGTGCAT GCCGGTGACC CGGACAGGGA AGGCCAATTG CTGGTGGATG AGGTGCTGGA CTATCTGGCG TTGTCGCCGG AAAAACGTCA CAGCGTCCGC CGTTGCCTGA TCAACGATCT CAACCCGCAG GCGGTGGAAC GCGCTATCGA ACGGCTGCGT GACAATCGCG ACTTTATCCC ACTTTGTGTC TCCGCCCTGG CGCGTTCCCG CGCCGACTGG CTGTATGGCA TCAACATGAC CCGCGCCTAC ACCATTTTGG GGCGTAATGC CGGTTATGAT GGCGTGTTGT CGGTGGGCCG GGTGCAAACA CCGGTGTTGG GGTTGGTCGT CAGGCGTGAC GAAGATATTG AAAATTTTGT CTCGAAGGAC TTCTTCGAGG TTAAAGCGCA CATCGTGACG CCTAAAGACG AACGTTTTGT CGCCCTGTGG CAACCGAGTG ACTCCTGCGA GCCTTATCAG GACGAAGAGG GGCGCTTGCT GCACCGATCG TTGGCAGAAC ACGTGCTCAA GCGTATCGAG GGCCAGCCCG CGCTGGTCAC CTCTTATAAT GATAAACGGG AATCAGATAC CGCACCCTTG CCGTTTTCAC TGTCGACCTT ACAGATTGAG GCTTCCAAAC GCTTCAACCT GAGCGCGCAG CAGGTACTGG ACGTGTGCCA GCGGCTGTAT GAAACCCATA AATTGATCAC CTATCCGCGT TCCGACTGCC GCTACCTGCC GGAAGAGCAT TTTGCCGGGC GGCATTCGGT GTTGAACGCC ATCAGCGTTC ATCAGCCGGA TCTGTATCCG CAGCCGGTGA TCGACAGCGA TCGCCGTAAC CGTTGCTGGG ACGACAAGAA GGTTGATGCT CACCACGCCA TTATTCCGAC CGCCCGTGCC AGTAAGGTTA GCCTCAGCCA GGATGAGCTG AACGTTTATG GCTTGGTGGC GCGGCAGTAC CTGATGCAGT TCTGCCCGGA CGCCATGTTC CGCAAATGCG TGATTGAGCT GGATATTGCC GGCGGCAAGT TTATCGCCAA GGCGCGTTTT CTTGCCGAAG CAGGCTGGCG AACACTGTTG GGCAGTAAAG AGCGTGATGA AGAAAATGAA GGCGCTCCGT TGCCGGTGGT GGCGAAGGAT GACCAGCTAC TGTGTGAACG TGGAGAGGTG GTTGAACGTC AGACCCAACC GCCACGTCCT TTTACCGATG CCAGCCTGCT TTCCGCCATG ACAGGGATTG CACGTTTCGT TCAGGATAAA GCACTAAAGA AAATCCTGCG AGCGACCGAT GGTTTAGGGA CAGAGGCCAC GCGCGCGGGC ATCATTGAGT TGCTGTTCAA GCGGGCGTTT TTGTATAAGA AAGGGCGCTA TATTCACTCC AGTGAAACCG GCCGGGCGTT GATCCATTCG CTGCCGGATA TTGCCGCCCG TCCTGATATG ACCGCCAACT GGGAAGCCAC GCTGACGCAA ATCAGTGAGA AATCCTGCCG TTATCAGGAC TTTATGCAAC CTCTGGTAGG CACTCTGCAG GAGCTGATTT ATCAGGCCAA GCAGAGTCGG GCGAGTATGG CGTTTCGCGG GTTGCCGCCG TCGCCTTCCG GCGGGGCGAA AAAACGCAAG AAAAGCGCCG GTAAGGCGCG GGAGAAGAGC GAATGA
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Protein sequence | MRLFIAEKPS LARAIADVLP KPHRRGDGFI ACGNNDVVTW CVGHLLEQAQ PDAYDSRYAR WSLADLPIIP EKWQLQPRPS VSKQLNAIKK LLHEADEVVH AGDPDREGQL LVDEVLDYLA LSPEKRHSVR RCLINDLNPQ AVERAIERLR DNRDFIPLCV SALARSRADW LYGINMTRAY TILGRNAGYD GVLSVGRVQT PVLGLVVRRD EDIENFVSKD FFEVKAHIVT PKDERFVALW QPSDSCEPYQ DEEGRLLHRS LAEHVLKRIE GQPALVTSYN DKRESDTAPL PFSLSTLQIE ASKRFNLSAQ QVLDVCQRLY ETHKLITYPR SDCRYLPEEH FAGRHSVLNA ISVHQPDLYP QPVIDSDRRN RCWDDKKVDA HHAIIPTARA SKVSLSQDEL NVYGLVARQY LMQFCPDAMF RKCVIELDIA GGKFIAKARF LAEAGWRTLL GSKERDEENE GAPLPVVAKD DQLLCERGEV VERQTQPPRP FTDASLLSAM TGIARFVQDK ALKKILRATD GLGTEATRAG IIELLFKRAF LYKKGRYIHS SETGRALIHS LPDIAARPDM TANWEATLTQ ISEKSCRYQD FMQPLVGTLQ ELIYQAKQSR ASMAFRGLPP SPSGGAKKRK KSAGKAREKS E
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