Gene Spro_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2718 
Symbol 
ID5606740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2993439 
End bp2995364 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content57% 
IMG OID640938259 
ProductDNA topoisomerase III 
Protein accessionYP_001478947 
Protein GI157370958 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.94815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00169428 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACTGT TTATTGCCGA GAAACCGAGT TTGGCGCGCG CCATTGCCGA CGTACTTCCC 
AAGCCGCATC GCCGCGGCGA CGGGTTTATC GCCTGCGGTA ACAATGATGT GGTGACCTGG
TGTGTGGGCC ACTTGTTAGA ACAGGCGCAG CCGGATGCCT ACGACAGCCG TTATGCGCGC
TGGTCGCTGG CCGATCTGCC GATCATCCCC GAAAAGTGGC AGTTGCAGCC ACGGCCTTCG
GTCAGCAAAC AGCTTAATGC CATCAAAAAG CTGCTGCACG AGGCCGATGA AGTGGTGCAT
GCCGGTGACC CGGACAGGGA AGGCCAATTG CTGGTGGATG AGGTGCTGGA CTATCTGGCG
TTGTCGCCGG AAAAACGTCA CAGCGTCCGC CGTTGCCTGA TCAACGATCT CAACCCGCAG
GCGGTGGAAC GCGCTATCGA ACGGCTGCGT GACAATCGCG ACTTTATCCC ACTTTGTGTC
TCCGCCCTGG CGCGTTCCCG CGCCGACTGG CTGTATGGCA TCAACATGAC CCGCGCCTAC
ACCATTTTGG GGCGTAATGC CGGTTATGAT GGCGTGTTGT CGGTGGGCCG GGTGCAAACA
CCGGTGTTGG GGTTGGTCGT CAGGCGTGAC GAAGATATTG AAAATTTTGT CTCGAAGGAC
TTCTTCGAGG TTAAAGCGCA CATCGTGACG CCTAAAGACG AACGTTTTGT CGCCCTGTGG
CAACCGAGTG ACTCCTGCGA GCCTTATCAG GACGAAGAGG GGCGCTTGCT GCACCGATCG
TTGGCAGAAC ACGTGCTCAA GCGTATCGAG GGCCAGCCCG CGCTGGTCAC CTCTTATAAT
GATAAACGGG AATCAGATAC CGCACCCTTG CCGTTTTCAC TGTCGACCTT ACAGATTGAG
GCTTCCAAAC GCTTCAACCT GAGCGCGCAG CAGGTACTGG ACGTGTGCCA GCGGCTGTAT
GAAACCCATA AATTGATCAC CTATCCGCGT TCCGACTGCC GCTACCTGCC GGAAGAGCAT
TTTGCCGGGC GGCATTCGGT GTTGAACGCC ATCAGCGTTC ATCAGCCGGA TCTGTATCCG
CAGCCGGTGA TCGACAGCGA TCGCCGTAAC CGTTGCTGGG ACGACAAGAA GGTTGATGCT
CACCACGCCA TTATTCCGAC CGCCCGTGCC AGTAAGGTTA GCCTCAGCCA GGATGAGCTG
AACGTTTATG GCTTGGTGGC GCGGCAGTAC CTGATGCAGT TCTGCCCGGA CGCCATGTTC
CGCAAATGCG TGATTGAGCT GGATATTGCC GGCGGCAAGT TTATCGCCAA GGCGCGTTTT
CTTGCCGAAG CAGGCTGGCG AACACTGTTG GGCAGTAAAG AGCGTGATGA AGAAAATGAA
GGCGCTCCGT TGCCGGTGGT GGCGAAGGAT GACCAGCTAC TGTGTGAACG TGGAGAGGTG
GTTGAACGTC AGACCCAACC GCCACGTCCT TTTACCGATG CCAGCCTGCT TTCCGCCATG
ACAGGGATTG CACGTTTCGT TCAGGATAAA GCACTAAAGA AAATCCTGCG AGCGACCGAT
GGTTTAGGGA CAGAGGCCAC GCGCGCGGGC ATCATTGAGT TGCTGTTCAA GCGGGCGTTT
TTGTATAAGA AAGGGCGCTA TATTCACTCC AGTGAAACCG GCCGGGCGTT GATCCATTCG
CTGCCGGATA TTGCCGCCCG TCCTGATATG ACCGCCAACT GGGAAGCCAC GCTGACGCAA
ATCAGTGAGA AATCCTGCCG TTATCAGGAC TTTATGCAAC CTCTGGTAGG CACTCTGCAG
GAGCTGATTT ATCAGGCCAA GCAGAGTCGG GCGAGTATGG CGTTTCGCGG GTTGCCGCCG
TCGCCTTCCG GCGGGGCGAA AAAACGCAAG AAAAGCGCCG GTAAGGCGCG GGAGAAGAGC
GAATGA
 
Protein sequence
MRLFIAEKPS LARAIADVLP KPHRRGDGFI ACGNNDVVTW CVGHLLEQAQ PDAYDSRYAR 
WSLADLPIIP EKWQLQPRPS VSKQLNAIKK LLHEADEVVH AGDPDREGQL LVDEVLDYLA
LSPEKRHSVR RCLINDLNPQ AVERAIERLR DNRDFIPLCV SALARSRADW LYGINMTRAY
TILGRNAGYD GVLSVGRVQT PVLGLVVRRD EDIENFVSKD FFEVKAHIVT PKDERFVALW
QPSDSCEPYQ DEEGRLLHRS LAEHVLKRIE GQPALVTSYN DKRESDTAPL PFSLSTLQIE
ASKRFNLSAQ QVLDVCQRLY ETHKLITYPR SDCRYLPEEH FAGRHSVLNA ISVHQPDLYP
QPVIDSDRRN RCWDDKKVDA HHAIIPTARA SKVSLSQDEL NVYGLVARQY LMQFCPDAMF
RKCVIELDIA GGKFIAKARF LAEAGWRTLL GSKERDEENE GAPLPVVAKD DQLLCERGEV
VERQTQPPRP FTDASLLSAM TGIARFVQDK ALKKILRATD GLGTEATRAG IIELLFKRAF
LYKKGRYIHS SETGRALIHS LPDIAARPDM TANWEATLTQ ISEKSCRYQD FMQPLVGTLQ
ELIYQAKQSR ASMAFRGLPP SPSGGAKKRK KSAGKAREKS E