| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2708 |
|---|
| Symbol | |
|---|
| ID | 5606621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2984341 |
|---|
| End bp | 2985684 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640938247 |
|---|
| Product | UDP-glucose 6-dehydrogenase |
|---|
| Protein accession | YP_001478937 |
|---|
| Protein GI | 157370948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0287014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000651143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA CAGTTTTTGG TATTGGCTAT GTTGGCCTGG TGCAGGCTGC GGTGTTGGCT
GAAGTCGGCC ACGACGTTAT GTGTATTGAT ATAGACGAAC GTAAAGTCGA AAACCTGAAG
AAAGGGAATA TCCCTATTTT TGAGCCAGGC CTGACGCCGT TGGTGCAGCA AAACTATGAA
GCAGGTCGCC TGCAGTTCAC CACCGATGCT AAAGCCGGCG TTGAACATGG CACCATTCAG
TTCATTGCCG TGGGCACGCC ACCGGATGAA GACGGCTCTG CCGACCTGAA GTATGTGACT
GCCGTGGCCC GCACCATCGC GGAACACATG ACCGATCATA AAGTGGTGAT CGATAAATCT
ACCGTACCGG TTGGCACCGC AGATAAAGTC CGTCAGGTTA TGGAAGAAAC GCTGCGCAAA
CGCGGCAGCA CGGTTCCGTT CGATGTGGTT TCCAACCCCG AATTCCTGAA GGAAGGCGCG
GCAGTAGCAG ACTGCATGCG TCCTGAGCGC ATTGTTATCG GTACCGATAA CAAAGATGTG
ATTGAACCTA TTCGCGAGCT GTATGAGCCG TTCAACCGCA ATCACGATCG CATGATCATG
ATGGATATTC GCAGTGCTGA ACTGACCAAG TATGCTGCCA ACTGTATGCT GGCGACCAAA
ATCAGCTTTA TGAATGAAAT GTCTAATCTG GCCGAAATGC TGGGTGCAGA CATTGAGAAA
GTGCGTCAGG GTATCGGTTC TGATTCCCGT ATTGGCTATC ACTTTATCTA CCCAGGCTGC
GGCTATGGTG GCTCCTGTTT CCCGAAAGAC GTTCAGGCCC TGATCCGCAC GGCTGAACAT
ATCGGCTATC AGCCAAAACT GTTGCAAGCC GTAGAGCAGG TTAACTATCA GCAAAAATAT
AAGCTGACCA AGTTTATCAA GCATCACTTT GGTGAAGATC TGAAAGGCAA AACCTTTGCG
CTTTGGGGGC TGGCATTCAA GCCAAATACC GATGACATGC GTGAGGCTTC CAGCCGGGTG
CTGATGGAGC AACTGTGGGA AGCGGGTGCT ACCGTTCAGG CCTACGACCC TGAAGCCATG
AACGAAGTTC AGCGCATCTA CGGTCAGCGT GACGATCTGA AACTGGTAGG TACCAAAGAA
GCGGCGCTGC AGGGCGCTGA CGCGCTGGTT ATCTGTACCG AATGGCAGAA CTTCCGCGCG
CCGGATTTCG ACGCGATCAA AGGCTCGTTA AAGCAGCCGG TGATCTTTGA TGGTCGTAAC
CTGTTTGATC CTGAGCGCCT GGAAAGCCGT GGCTTTACCT ATTATGCGAT TGGTCGCGGT
GCGTCCATTC AGCCGGTTAT ATAA
|
|---|
| Protein sequence | MKVTVFGIGY VGLVQAAVLA EVGHDVMCID IDERKVENLK KGNIPIFEPG LTPLVQQNYE
AGRLQFTTDA KAGVEHGTIQ FIAVGTPPDE DGSADLKYVT AVARTIAEHM TDHKVVIDKS
TVPVGTADKV RQVMEETLRK RGSTVPFDVV SNPEFLKEGA AVADCMRPER IVIGTDNKDV
IEPIRELYEP FNRNHDRMIM MDIRSAELTK YAANCMLATK ISFMNEMSNL AEMLGADIEK
VRQGIGSDSR IGYHFIYPGC GYGGSCFPKD VQALIRTAEH IGYQPKLLQA VEQVNYQQKY
KLTKFIKHHF GEDLKGKTFA LWGLAFKPNT DDMREASSRV LMEQLWEAGA TVQAYDPEAM
NEVQRIYGQR DDLKLVGTKE AALQGADALV ICTEWQNFRA PDFDAIKGSL KQPVIFDGRN
LFDPERLESR GFTYYAIGRG ASIQPVI
|
|---|
| |