| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2680 |
|---|
| Symbol | |
|---|
| ID | 5606227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2949950 |
|---|
| End bp | 2950918 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640938219 |
|---|
| Product | inosine/uridine-preferring nucleoside hydrolase |
|---|
| Protein accession | YP_001478909 |
|---|
| Protein GI | 157370920 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00139292 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAA AAGTCATTTT TGATACGGAT CCCGGTATTG ATGACACTAT GGCGATGCTA
TTGGCGCATG CCAGTGACCA GATTGAGCTG GTGGGCATTA CCACGGTTTT TGGCAATGCG
ACCATTGAGA ATGCCACAAG AAACGCCCTG TATATAAAGC AGCGGTTTGG CCTGACTGCT
GATGTCGCCG TGGGCGCGGA TACGCCTTTG GTGGTAGCGG CGGGTGAGGC GACCACTTTC
GTTCACGGCG AAAATGGTTT GGGGGATATA GATATCCCCG CGGGGGATTA CCAGGGTATT
GATAAGCGAG CGGCACATGA CTACATCATC GATAGCGTAA AAGCGCATCC CGGTGAAATC
ACGCTGATTG CCGTCGGCAG GTTGACCAAT CTTGCCCTGG CGGTTGAAAA GGATCCCGGT
ATCGCCAGCC TGGTTAAAGA GGTGATTATT ATGGGCGGGG CATTTGGCCA TCACGGGCAT
ACGGGCAATG TTACCCCTTT TGCCGAGGCC AATATTATCG GTGATCCGCA TGCTGCCGAT
AGGGTGATGA CCACCGACTG GCCGGTTACC GTCGTCGGAC TGGATGTCAC TCAGCAAACG
GTGATGAGCA GCGAATATAT TGAGCGGTTG CGCATCAATT CAGCCCGGTA CGGTGAGTTC
ATTTACCAGA TCACGCGTTT TTACGCTGAT TTTCATAAGA GGGAGATCGG CATGGATGGA
TTCTATGTAC ATGACTCCTC GGCCATTGCC TATGCCATTG CGCCCGAGTT GTTTGACGTA
AAAGTCGGTG CTGTACGGGT GATTACCGAG GGGCCGGCCA TCGGGCATAC CCTGCTTAAG
GAAGGGGCGA AACCTTACCC TATCGATGAG TGGAGTGGCA AACCTCAGCA ACGGGTCTGT
GTTCAGGTTG ACCATCGGGG CGTGCTTGAT CTCTATATGG CGACCATGGC GGAGAGGGTT
ACCGCTTAG
|
|---|
| Protein sequence | MKRKVIFDTD PGIDDTMAML LAHASDQIEL VGITTVFGNA TIENATRNAL YIKQRFGLTA
DVAVGADTPL VVAAGEATTF VHGENGLGDI DIPAGDYQGI DKRAAHDYII DSVKAHPGEI
TLIAVGRLTN LALAVEKDPG IASLVKEVII MGGAFGHHGH TGNVTPFAEA NIIGDPHAAD
RVMTTDWPVT VVGLDVTQQT VMSSEYIERL RINSARYGEF IYQITRFYAD FHKREIGMDG
FYVHDSSAIA YAIAPELFDV KVGAVRVITE GPAIGHTLLK EGAKPYPIDE WSGKPQQRVC
VQVDHRGVLD LYMATMAERV TA
|
|---|
| |