Gene Spro_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2659 
Symbol 
ID5605718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2929525 
End bp2930571 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content56% 
IMG OID640938198 
Productputative periplasmic protease 
Protein accessionYP_001478888 
Protein GI157370899 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0477819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000288065 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGAGTTTA TATCTGTTTA CGGCCTGTTT TTGGCCAAAG TCGCGACGGT AGTGATTGCC 
ATCGCCGCGC TGGCGTTGCT GGCGGTCAGC CTGGGGCAAC GCAAGAACCG CCAGAAAGGG
GAACTGCAGC TGACTGACCT CGGTGAACAA TATCGCGACA TGCAGCGTGA TATGCGCCTG
GCGCGCATGG GTGATGCGGA ACAAAAGGCC TGGAACAAGC AGTTTAAAAA ACAGACCAAG
GCCGATGACA AACTGAAGAA ACAACGCGCT AAAGCCGGTG CGGTTGAAGC CACCAAGCCT
TGCCTGTACG TGCTGGATTT CAAAGGCAGC ATGGATGCCC ATGAGGTGAC CTCACTGCGT
GAAGAAATCT CGGCGGTGCT GGCGGTGGCG ACGCCGCAAG ACGAAGTGTT GCTGCGGTTG
GAAAGCCCGG GTGGGGTGGT ACACGGTTAC GGCCTGGCGT CATCGCAACT GGCACGTTTG
CGCACCGGCG GTATTCGCCT GACGGTAGCG GTAGACAAGG TGGCGGCCAG TGGGGGCTAT
ATGATGGCCT GCGTGGCGGA TCGCATTGTT GCGGCTCCCT TTGCCATCAT CGGTTCAATT
GGTGTTGTGG CGCAAATCCC CAACTTCCAC CGCCTGCTGA AAAAGAATGA TATTGATGTA
GAGCTGCACA CCGCCGGCGA GTTCAAACGC ACGCTGACGC TGTTTGGTGA AAATACCGAG
CAGGGGCGTG AGAAATTCCG TGAAGATCTG AACGACACCC ATGAGCTGTT TAAACAGTTT
GTGCATCAGC AACGTCCATC GCTGGATATC GACAGCGTGG CGACCGGTGA ACATTGGTTC
GGCACTCAGG CGAAAGAGAA AGGGCTGATT GACGCTATTG GCACCAGTGA CGATTTACTG
ATCGCTGAAA TGGAGAATCA CGAGGTGGTC GGGGTGCGCT ATGCACGTCG CAAACGCATG
ATGGACCGTT TTACCGGCAG TGCGGCAGAA AGTGTCGATC GTCTGCTGTT ACGCTGGTGG
CAGCGTGGTG AAAAGCCACT GCTTTAA
 
Protein sequence
MEFISVYGLF LAKVATVVIA IAALALLAVS LGQRKNRQKG ELQLTDLGEQ YRDMQRDMRL 
ARMGDAEQKA WNKQFKKQTK ADDKLKKQRA KAGAVEATKP CLYVLDFKGS MDAHEVTSLR
EEISAVLAVA TPQDEVLLRL ESPGGVVHGY GLASSQLARL RTGGIRLTVA VDKVAASGGY
MMACVADRIV AAPFAIIGSI GVVAQIPNFH RLLKKNDIDV ELHTAGEFKR TLTLFGENTE
QGREKFREDL NDTHELFKQF VHQQRPSLDI DSVATGEHWF GTQAKEKGLI DAIGTSDDLL
IAEMENHEVV GVRYARRKRM MDRFTGSAAE SVDRLLLRWW QRGEKPLL