Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2657 |
Symbol | |
ID | 5605703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2926204 |
End bp | 2928801 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640938196 |
Product | DNA topoisomerase I |
Protein accession | YP_001478886 |
Protein GI | 157370897 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000104499 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000870588 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGGTAAAG CTCTCGTAAT AGTTGAGTCC CCGGCAAAAG CCAAAACTAT TAATAAATAT TTAGGTAATG ACTACGTGGT GAAGTCCAGC GTCGGTCATA TCCGTGATTT GCCGACCAGT GGCTCAGCCA GCAAAAAGAG CGCTGACTCA ACCGAAGACA AAGCCAAGAA GAAAGTTAAA AAAGATCCAA CGACGGCGCT GGTAAATCGT ATGGGCGTCG ATCCCTACCA TGGCTGGAAA GCGCATTACG AAATCCTGCC GGGTAAAGAA AAAGTTGTTG CCGAGTTAAA GTCGTTAGCG GAAAACGCCG ACCACATTTA TCTCGCAACC GACCTTGACC GCGAAGGGGA AGCCATTGCC TGGCACCTGC GGGAAGTTAT CGGTGGTGAC GACAAACGCT TTAGCCGCGT GGTGTTTAAC GAAATTACCA AGAACGCGAT CCAAAACGCG TTCAAACAGC CCGGCGAACT GAATATCGAC CGTGTCAACG CACAGCAGGC GCGTCGCTTT ATGGACCGCG TGGTGGGTTA CATGGTCTCG CCACTGCTAT GGAAAAAAAT TGCCCGTGGC TTGTCCGCTG GGCGAGTGCA ATCCGTTGCG GTTCGACTGG TGGTGGAGCG TGAGCGCGAC ATCAAAGCCT TCGTGCCGGA AGAATACTGG GAGTTGCACG CCGATCTGTT GGCGAAGGGT GATACCGCGC TGCAGATGGA AGTGACCCAT GCCCACGACA AACCCTTCAA ACCGGTTAAC CGTGAGCAGA CTCACGCCGC ACTCAACGTG CTGGAAAAAG CCCGTTATAC GGTACTGGAT CGCGAAGACA AGCCGACCAG CAGCAAGCCG GGCGCACCTT ATATTACTTC TACGTTGCAG CAGGCGGCCA GTACCCGTCT GAGCTTTGGC GTGAAGAAAA CCATGATGAT GGCTCAGCGC CTGTATGAAG CCGGTCACAT CACCTATATG CGTACCGACT CCACCAACCT GAGCCAGGAT GCGCTCGAGA TGGTGCGTGG CTACATCGGT GACAACTTCG GCGACAAGTA CCTGCCGAAA GCGCCGAACC AGTACAGCAG CAAAGAAAAC TCGCAGGAAG CACACGAAGC CATCCGTCCG TCGGATGTCA ACGTGCTGGC CGAGCAGTTG AAAGATATGG AAGCGGATGC GCAAAAACTG TATCAGCTGA TTTGGCGCCA GTTTGTGGCC TGTCAGATGA CACCGGCGCA GTACGACTCC ACCACGCTGT CGGTGAAGGC CGCTGATTAC CAGCTGCGCG CCAAAGGCCG TACGCTGCGT TTCGATGGCT GGACCAAAGT GATGCCTGCT CTGCGTAAGG GTGATGAAGA CCGCACCTTG CCGTATGTTG AAGTAGGTAG CGATCTGGAA CTGCAGAAAC TGATCCCAAG CCAGCACTTT ACCAAACCGC CGGCGCGTTA TAGCGAAGCG TCATTGGTAA AAGAGTTGGA AAAACGGGGT ATCGGCCGTC CTTCAACCTA CGCTTCGATC ATTTCCACCA TTCAGGATCG TGGTTATGTG CGAGTCGAAA GCCGCCGTTT CTACGCTGAG AAAATGGGTG AGATCGTTAC CGACCGCCTG GAAGAAAACT TCCGCGAGCT GATGAACTAT GACTTCACCG CACGCATGGA AAACGGTCTG GACCAGGTAG CCAACAACCA GGCCGAGTGG AAAGCGGTGC TGGATGAGTT CTTTGCCGAG TTCAGCGAAC AGCTGGAAAC GGCGGAGAAA GAGCCGGAAG AAGGCGGTAT GCGCCCGAAT CAGATGGTGA TGACCAGTAT CGATTGCCCA ACCTGCGGTC GCAAGATGGG TATCCGTACT GCCAGCACCG GCGTTTTCCT GGGTTGCTCC GGCTATGCAT TGCCGCCGAA GGAACGTTGT AAAACCACCA TTAACCTGGT GCCGGAAACG GAAGTGCTCA ACATTCTCGA AGGGGATGAC GCGGAAACCA ACGCGTTGCG TGCCCGCCGT CGCTGCCAGA AATGCGGCAC GGCGATGGAC AGCTACCTGA TCGATAACCA GCGCAAGCTG CACGTGTGCG GTAACAACCC GGCGTGTGAC GGCTATGAGA TTGAAGAGGG TGAGTTCCGC CTGAAAGGGT ACGACGGCCC TGTGGTTGAG TGCGATAAGT GTGGTTCTGA AATGCACCTG AAAATGGGGC GCTTCGGTAA GTACATGGGT TGCACCAACG AGAGCTGCAA AAATACCCGT AAGATCCTGC GTAATGGTGA TGTTGCACCG CCGAAGGAAG ATCCGGTTCC ATTGCCGGAG CTGCCATGCG AAAAGTCGGA CGCTTACTTT GTTCTGCGTG ACGGCGCTGC CGGTGTGTTC CTGGCGGCCA ATACCTTCCC TAAATCGCGC GAAACCCGTG CGCCGTTGGT GGAAGAGTTG GCCCGCTTCA AGGACCGTCT GCCTGAAAAA CTGCGTTATC TGGCGGATGC GCCGGTGGCC GATGCGGAAG GCAACAAAAC GCTGGTGCGT TTCAGCCGCA AGACCAAGCA GCAGTATGTC TCGGCAGAGA AAGACGGCAA AGCCACTGGT TGGTCTGCTT TCTACATCGA TGGCAAATGG GTTGAAGGCA AAAAATAA
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Protein sequence | MGKALVIVES PAKAKTINKY LGNDYVVKSS VGHIRDLPTS GSASKKSADS TEDKAKKKVK KDPTTALVNR MGVDPYHGWK AHYEILPGKE KVVAELKSLA ENADHIYLAT DLDREGEAIA WHLREVIGGD DKRFSRVVFN EITKNAIQNA FKQPGELNID RVNAQQARRF MDRVVGYMVS PLLWKKIARG LSAGRVQSVA VRLVVERERD IKAFVPEEYW ELHADLLAKG DTALQMEVTH AHDKPFKPVN REQTHAALNV LEKARYTVLD REDKPTSSKP GAPYITSTLQ QAASTRLSFG VKKTMMMAQR LYEAGHITYM RTDSTNLSQD ALEMVRGYIG DNFGDKYLPK APNQYSSKEN SQEAHEAIRP SDVNVLAEQL KDMEADAQKL YQLIWRQFVA CQMTPAQYDS TTLSVKAADY QLRAKGRTLR FDGWTKVMPA LRKGDEDRTL PYVEVGSDLE LQKLIPSQHF TKPPARYSEA SLVKELEKRG IGRPSTYASI ISTIQDRGYV RVESRRFYAE KMGEIVTDRL EENFRELMNY DFTARMENGL DQVANNQAEW KAVLDEFFAE FSEQLETAEK EPEEGGMRPN QMVMTSIDCP TCGRKMGIRT ASTGVFLGCS GYALPPKERC KTTINLVPET EVLNILEGDD AETNALRARR RCQKCGTAMD SYLIDNQRKL HVCGNNPACD GYEIEEGEFR LKGYDGPVVE CDKCGSEMHL KMGRFGKYMG CTNESCKNTR KILRNGDVAP PKEDPVPLPE LPCEKSDAYF VLRDGAAGVF LAANTFPKSR ETRAPLVEEL ARFKDRLPEK LRYLADAPVA DAEGNKTLVR FSRKTKQQYV SAEKDGKATG WSAFYIDGKW VEGKK
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