Gene Spro_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2643 
Symbol 
ID5605496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2913095 
End bp2913841 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID640938182 
ProductDeoR family transcriptional regulator 
Protein accessionYP_001478872 
Protein GI157370883 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00470761 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000206401 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCAA GACAACAGAC AATATTGCAA TTGGTTAACG ATCGTCGGCG CATCAGCGTC 
AGCGATTTAG CTGCCGCTAC CGGTGTTTCT GAGGTGACAA TCCGTCAGGA TTTGAACCTG
CTGGAGAAAC GCAGCTATTT GAAACGGGTG CATGGTTCCG CGCTGGCGCT GGAAAGTGAC
GACGTCGATG CACGCATGAT GTCCAACTTC ACCCTCAAGC AAAAGCTGGC GCAATATGCC
GCGTCGCTGG TTAACGACGA TGAAACCATC TTTATCGAAA GCGGCAGTGC CAACGCGCTG
TTGGCTCGCT ACATTGCCGA ACGCAAGCGC ATCACGCTGA TCACCGTCAG CCACTATATC
GCCAACCTGC TGAAAGAGAC CGACTGCGAG GTGATCGTGC TGGGCGGCCT GTATCAGAAA
AAAAGCGAAA CCGTGGTCGG GCCGCTAACG CGACAATGTA TTCAGCAGGT GCATTTCAGC
AAGGCGTTTA TCGGCATTGA TGGCTACCAT GCGGACACCG GCTTTACCGG TCGCGATATG
ATGCGCGCCG ATGTGGTTAA TGCCGTGCTG GCCAAGGGCG TAGAGAATAT TGTCCTGACC
GACTCGTCCA AGTTTGGTCA AATACAGCCC AACCCACTGA CTCAGCAGGG AAAAGTGCAT
CGGGTGATCA CCGATTCCCG GCTGTCACTG GACTATCAGC ACCAGTTAAA ACGCCAGGGA
ATACAGTTGG ATATAGTAAA CGACTAG
 
Protein sequence
MNSRQQTILQ LVNDRRRISV SDLAAATGVS EVTIRQDLNL LEKRSYLKRV HGSALALESD 
DVDARMMSNF TLKQKLAQYA ASLVNDDETI FIESGSANAL LARYIAERKR ITLITVSHYI
ANLLKETDCE VIVLGGLYQK KSETVVGPLT RQCIQQVHFS KAFIGIDGYH ADTGFTGRDM
MRADVVNAVL AKGVENIVLT DSSKFGQIQP NPLTQQGKVH RVITDSRLSL DYQHQLKRQG
IQLDIVND