Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2643 |
Symbol | |
ID | 5605496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2913095 |
End bp | 2913841 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640938182 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001478872 |
Protein GI | 157370883 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00470761 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000206401 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATTCAA GACAACAGAC AATATTGCAA TTGGTTAACG ATCGTCGGCG CATCAGCGTC AGCGATTTAG CTGCCGCTAC CGGTGTTTCT GAGGTGACAA TCCGTCAGGA TTTGAACCTG CTGGAGAAAC GCAGCTATTT GAAACGGGTG CATGGTTCCG CGCTGGCGCT GGAAAGTGAC GACGTCGATG CACGCATGAT GTCCAACTTC ACCCTCAAGC AAAAGCTGGC GCAATATGCC GCGTCGCTGG TTAACGACGA TGAAACCATC TTTATCGAAA GCGGCAGTGC CAACGCGCTG TTGGCTCGCT ACATTGCCGA ACGCAAGCGC ATCACGCTGA TCACCGTCAG CCACTATATC GCCAACCTGC TGAAAGAGAC CGACTGCGAG GTGATCGTGC TGGGCGGCCT GTATCAGAAA AAAAGCGAAA CCGTGGTCGG GCCGCTAACG CGACAATGTA TTCAGCAGGT GCATTTCAGC AAGGCGTTTA TCGGCATTGA TGGCTACCAT GCGGACACCG GCTTTACCGG TCGCGATATG ATGCGCGCCG ATGTGGTTAA TGCCGTGCTG GCCAAGGGCG TAGAGAATAT TGTCCTGACC GACTCGTCCA AGTTTGGTCA AATACAGCCC AACCCACTGA CTCAGCAGGG AAAAGTGCAT CGGGTGATCA CCGATTCCCG GCTGTCACTG GACTATCAGC ACCAGTTAAA ACGCCAGGGA ATACAGTTGG ATATAGTAAA CGACTAG
|
Protein sequence | MNSRQQTILQ LVNDRRRISV SDLAAATGVS EVTIRQDLNL LEKRSYLKRV HGSALALESD DVDARMMSNF TLKQKLAQYA ASLVNDDETI FIESGSANAL LARYIAERKR ITLITVSHYI ANLLKETDCE VIVLGGLYQK KSETVVGPLT RQCIQQVHFS KAFIGIDGYH ADTGFTGRDM MRADVVNAVL AKGVENIVLT DSSKFGQIQP NPLTQQGKVH RVITDSRLSL DYQHQLKRQG IQLDIVND
|
| |