Gene Spro_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2577 
Symbol 
ID5604522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2834140 
End bp2834910 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content57% 
IMG OID640938116 
ProductDeoR family transcriptional regulator 
Protein accessionYP_001478806 
Protein GI157370817 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATA CCCTAAAACG ACGGGAATTA ATTATCGACC AGCTTTGTCG CGAAGGCTCA 
GTGCGCGTCG AGCAACTCAG CGCCCAGTTT TCGGTTTCCA GCGTCACTAT TCGCAGCGAC
CTGCGCCAAC TGGAAAAAAG CGGCTGTGCG GTCCGTGCCT ATGGCGGCGC AATGCTCAAT
AAGCAGTTCG CCTTCGATCG TCCGCTACAG GACAAGGGGC GCCTCAATCG CGACGTGAAA
TACGCCATTG CCTGCGCGGC GGCGGAACTG GTCAAAGACG GCGATGCCAT CATTCTCGAC
TCCGGTTCGA CCACCAGCCA AATGGCGCAG CAGCTGGTCG GTAAAAAGGA TCTGGTGGTG
ATGACCAATG CGCTGAATAT CGCTTTCGAA CTGGCCAACA ACGAACAGGT TGACCTGATG
GTGGTCGGCG GCAGCGTACG ACGCAAATCC TGGTCTTTGT ATGGCCCGGC CGCCGAGCAA
CACATGCGTC AGTTCCGTTT CGACAAGCTG TTTCTCGGCG TCGACGGTTT TGACCTGATT
AGCGGCATCA CCACGCCGGA TCCCGGTGAA GCGCAACTCA ACCGCGCCAT GTGCGACGTA
GCGCGTGAAG TGATCGCCGT AGCGGACGCC AGCAAGTTCG GCCGCACCAG CTTTTGCATG
ATCCGTGAAA TCGGCCAAAT CCAGCGTTTG GTCACCGACA GCCGCATTCC GGAAAGCTAC
CTGCATGCGC TGAACCATTT AGGGGTCGAC GTGATTATCG CCGACCGTTA A
 
Protein sequence
MINTLKRREL IIDQLCREGS VRVEQLSAQF SVSSVTIRSD LRQLEKSGCA VRAYGGAMLN 
KQFAFDRPLQ DKGRLNRDVK YAIACAAAEL VKDGDAIILD SGSTTSQMAQ QLVGKKDLVV
MTNALNIAFE LANNEQVDLM VVGGSVRRKS WSLYGPAAEQ HMRQFRFDKL FLGVDGFDLI
SGITTPDPGE AQLNRAMCDV AREVIAVADA SKFGRTSFCM IREIGQIQRL VTDSRIPESY
LHALNHLGVD VIIADR