| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2544 |
|---|
| Symbol | |
|---|
| ID | 5604166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2799847 |
|---|
| End bp | 2800902 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640938083 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001478773 |
|---|
| Protein GI | 157370784 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TGAAAGGTCC AAGCCTGCAT CTGGCACAGT TCAGTGACGA TGCCGCCCCC
TTTAACAGCC TGCCGGCTAT CGCCCAGTGG GCGGCGCAAA CCGGCTTTAA AGCTTTGCAA
ATTCCGGCAT GGGATAGTCG CCTGTTTGAT TTGGCCACCG CCGCAGAAAG CCAAACCTAT
TGTGATGAGC TGGTCGGCAT GTTGGCAGAC CATGGCCTGG TGGTCAGTGA ACTCACTACC
CATATTTTTG GCCAGTTGAT GGCAGTGCAT CCGGCCTATG ACGCATTGTG CGACAGTTTT
GCGCCAGCGG AACTGCATGG CAACCCGCAG GCGCGCGGTG AATGGGCGCA CCGGCAGTTG
CTGTTGGCGG CCAAAGCCTC TGCGCGGTTG GGACTCAGTG AGATGGGCAC CTTCTCCGGT
TCCCTGGCCT GGCCGTATTT GTTCCCGTTC CCGCAGCGTC CGGCGGGGCT GATCGAAACG
GCGTTCGATG AACTGGCCAA ACGCTGGTTG CCGGTGCTCA ACGCCTGCGA CGAGCAGGGA
GTGAACCTGT GTTATGAAAT TCACCCGAGC GAAGATCTGC ACGACGGCGT GACCTTTGAA
ATGTTTCATC AGCGCGTTGG GGCACATCCG CGTTGCCAGA TCCTGTTCGA CCCGAGTCAC
TTCGTGCTGC AACAGTTGAA CTATCTGGAT TACATCGATA TTTACAAGGA CTTTATCCGC
ATGTTCCACG TCAAGGACGC CGAGTTCAAC CCGACCGGAC GGCAGGGCAT TTACGGCGGC
TATCAGTCAT GGACCGACCG TGCCGGACGT TTCCGCTCAT TGGGTGACGG CCAGGTGGAT
TTCAAAGGCA TTTTCTCGCG GCTGACCCAG CATGGCTACG CCGGTTGGGC GACGCTGGAG
TGGGAATGCT GCCTGAAACA CCCGCAGGAT GGCGCACGCG AAGGCGCGGC CTTTATTCGT
GACCACATCA TCAACGTCAC CGACAAGGTG TTTGATGACT TTGCCGGCGC GCCGGTTGAC
CAACAGCAAA TCAATACCTT GCTTGGCCTG CGCTGA
|
|---|
| Protein sequence | MKTLKGPSLH LAQFSDDAAP FNSLPAIAQW AAQTGFKALQ IPAWDSRLFD LATAAESQTY
CDELVGMLAD HGLVVSELTT HIFGQLMAVH PAYDALCDSF APAELHGNPQ ARGEWAHRQL
LLAAKASARL GLSEMGTFSG SLAWPYLFPF PQRPAGLIET AFDELAKRWL PVLNACDEQG
VNLCYEIHPS EDLHDGVTFE MFHQRVGAHP RCQILFDPSH FVLQQLNYLD YIDIYKDFIR
MFHVKDAEFN PTGRQGIYGG YQSWTDRAGR FRSLGDGQVD FKGIFSRLTQ HGYAGWATLE
WECCLKHPQD GAREGAAFIR DHIINVTDKV FDDFAGAPVD QQQINTLLGL R
|
|---|
| |