Gene Spro_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2500 
Symbol 
ID5603658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2744848 
End bp2746284 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content54% 
IMG OID640938039 
Productglycoside hydrolase family protein 
Protein accessionYP_001478729 
Protein GI157370740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AACAGTTACC GAAAGATTTT CTGTGGGGTG GCGCGGTCGC CGCACACCAG 
GTTGAAGGTG GTTGGGATCA GGGCGGTAAA GGCCCAAGCA TCGCTGACGT ACTGTCAGGT
GGCGCGCACG GCGTGGATCG CGTAATGACC GATGGCGTAC TTGAAGGTTA TCGTTATCCT
AACCATGAGG CAGTGGATTT CTACGGCCGC TACAAGCAGG ATATTGCGCT GTTCGCGGAG
ATGGGTTTCA AATGCTTCCG CACCTCAATC GCCTGGACGC GTATTTTCCC CAAGGGTGAC
GAACTGGAGC CGAACGAAGC CGGTCTGCAA TTCTATGACG ATCTGTTTGA TGAGCTGCTC
AAATACAATA TCCAGCCGGT GATCACCCTG TCCCACTTTG AAATGCCCTA TCATCTGGTG
AAAGAATATG GCGGCTGGAA AAACCGTCAG GTAGTTGATT TCTTTGTACG TTTCAGTGAA
GTGGTACTGC GCCGTTATCA GCACAAAGTC AAATACTGGA TGACCTTTAA CGAGATCAAC
AACCAGAGCA ACTACCAGTA TCCGCTGTTC GGCTACTGCT GCTCCGGCGT GGTCTACAGT
GAAGAACAAA ACCCGGAACA AACGCTGTAT CAGGTGTTGC ACCATCAGTT CGTTGCCAGC
GCCCAGGTGG TGAAACTGGG CCACCAGATT AACCCTGAGT TCAAAATCGG CTGTATGCTG
GCCTGCGTGC CCTTCTACCC GTTCTCCTGC AAGCCGGATG ACGTGATGTA CAGCGTCGAA
GCCATGCACC AGCGTTATTT GTTCACCGAC GTTCAGGTGC GCGGTTACTA TCCGTCGTAT
CTGCTGCGTG ACTGGCAGCG CAAAGGTTTC CAGATAGAAA TGCAGCCACA GGACGAGCAA
ACCCTGCGTG AAGGCTGCGC GGATTACATC GGTTTCAGCT ACTACATGAG CAACGCCCTG
CAGGCCGATG CGGTGAGCAG CAGCGACCCG ATGTTCGGTT TCCCCGGTAA TGTGCCTAAC
CCGCATGTTA AAGCCTCCGA CTGGGGCTGG CAGATTGACC CGGTTGGCCT GCGTTATTCG
TTGAACGTGC TCTACGAGCG CTATCAGAAG CCGCTGTTTA TCGTTGAAAA TGGCTTTGGT
GCCTTCGACA AGGTCGAGGC CGACGGTCAA ATCAACGATG ACTACCGCAT CGATTATCTG
AGTGCGCATA TCGAACAGAT GAAAAAAGCG GTGATCGAAG ACGGCGTGGA TCTGATTGGT
TACACCCCGT GGGGCTGTAT CGACTGCGTT TCCTTCACCA CCGGTGAATA CGGCAAGCGC
TACGGCTTTA TCTACGTCGA CAAACACGAC GACGGCACCG GCACGCTGGA GCGATCGCGC
AAGAAGAGCT TCGACTGGTA CCGCCGCGTG ATCGCCAGCA ACGGCGAACA GCTTTAG
 
Protein sequence
MKQQQLPKDF LWGGAVAAHQ VEGGWDQGGK GPSIADVLSG GAHGVDRVMT DGVLEGYRYP 
NHEAVDFYGR YKQDIALFAE MGFKCFRTSI AWTRIFPKGD ELEPNEAGLQ FYDDLFDELL
KYNIQPVITL SHFEMPYHLV KEYGGWKNRQ VVDFFVRFSE VVLRRYQHKV KYWMTFNEIN
NQSNYQYPLF GYCCSGVVYS EEQNPEQTLY QVLHHQFVAS AQVVKLGHQI NPEFKIGCML
ACVPFYPFSC KPDDVMYSVE AMHQRYLFTD VQVRGYYPSY LLRDWQRKGF QIEMQPQDEQ
TLREGCADYI GFSYYMSNAL QADAVSSSDP MFGFPGNVPN PHVKASDWGW QIDPVGLRYS
LNVLYERYQK PLFIVENGFG AFDKVEADGQ INDDYRIDYL SAHIEQMKKA VIEDGVDLIG
YTPWGCIDCV SFTTGEYGKR YGFIYVDKHD DGTGTLERSR KKSFDWYRRV IASNGEQL