| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2497 |
|---|
| Symbol | |
|---|
| ID | 5603596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2741548 |
|---|
| End bp | 2742498 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640938036 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001478726 |
|---|
| Protein GI | 157370737 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTC ATACGCCCAA TGAACTGCTG TTAATCGCTC CCGTGATGGA AAACCTGCTT
GCCCGTCTTG AGGCAACCTT TGTGGTGCAC CGGCTGTATG AGCAGGCGGA CCCGGTCAAT
TTTCTGGCGA CCCGCGGCGA AGCCATCCGC GCGGTCGTCA CCCGTGGCGA TATCGGTGTC
ACCACGCCGG TGCTCGAGCA GCTACCGCAA CTGGGGCTGA TTGCAGTGTT CGGCGTCGGT
ACTGACGCCA TTGACCTGAA CTACACCCGT CAGCGCGACA TCGCGGTAAC CATCACCTCC
GGCGCGTTGA CCGAAGACGT GGCGGATATG GCGCTGGGGT TGCTGTTGGC CACCGCCCGC
CAGCTTTGCT TCAATGACCG CTTTGTCCGT GACGGGCACT GGCTGCAAAA GGCCCCGGGC
TTGTCGGTGC AGGTCAGCGG TAAACGACTG GGGATTTTTG GTATGGGCAA CATCGGCCGC
GCCATCGCCC AGCGCGCCGC CGGTTTCAAC ATGCGTATCC AATATGCCAG CCATCGGCAG
GACACCACGC TGCCCTATGC TTATTACCCG GACTTGCTGG CGCTGGCGCA GGAAAGCGAT
TTTCTGGTGA TCGCCATCTC CGGTGGCAAG GACAGCGCAG GCCTGGTGGA CAAAACCGTA
TTTGATGCGT TGCCGGCGCA TGCGCTGGTG ATCAACATTG CCCGTGGCAG CATCGTCAAC
GAAAAGGACC TGATCGCCGC GTTGCAAAAC GGTGACATTG CCGGTGCCGG GCTGGATGTT
TATGCCCAGG AGCCACAGGT GCCTGCCGAG CTGATCGCCA TGGATAATGT CGTGTTGCAG
CCGCATATTG CCAGTGCCAC GCAGGAAACC CGGCAAAAAA TGAGCGACAT CGTATTTACC
AACGTTGAAG CCTTTTTCAA TCAGGCACCG TTACCCCACG CCATTGAATA A
|
|---|
| Protein sequence | MTTHTPNELL LIAPVMENLL ARLEATFVVH RLYEQADPVN FLATRGEAIR AVVTRGDIGV
TTPVLEQLPQ LGLIAVFGVG TDAIDLNYTR QRDIAVTITS GALTEDVADM ALGLLLATAR
QLCFNDRFVR DGHWLQKAPG LSVQVSGKRL GIFGMGNIGR AIAQRAAGFN MRIQYASHRQ
DTTLPYAYYP DLLALAQESD FLVIAISGGK DSAGLVDKTV FDALPAHALV INIARGSIVN
EKDLIAALQN GDIAGAGLDV YAQEPQVPAE LIAMDNVVLQ PHIASATQET RQKMSDIVFT
NVEAFFNQAP LPHAIE
|
|---|
| |