| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2470 |
|---|
| Symbol | |
|---|
| ID | 5602969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2705642 |
|---|
| End bp | 2707093 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640938009 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001478699 |
|---|
| Protein GI | 157370710 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACT ATTCTTCTTT ACTGCGCAAC GGTTGGTACT GTGACGGCCA ATGGCGAACC
AGTACCCAGC ACTATCAGGT CAGCAATCCC GCCACCGGAG AATCGGTGGC TGAGGTCGCT
TCGGTTGGCA GCGCAGAAAC CAACGAGGCC ATTACAGCAG CTGCCGCGGC TCTGCCGGCG
TGGCGTGCCT TGCCCGCCAA GGCACGAGCA CAAATCCTGC AACGCTGGTA TCAACTGATC
ATGGAAAATC AGGCGGCATT GGCTGCGCTG ATGGTCACCG AACAAGGCAA GGTATTGAGC
GAAGCCCAGG GCGAAGTCGC TTACGCCGCC AGCTTTATCG AATGGTTTGC CGAAGAATCC
AAACGCGCTT ATGGGCAGAC CATTCCGGCG ACCAAGGCCG GTAACCAAAT CATCACCTTT
AAAGAGCCGG TCGGCGTGAT TGCGGCTATC ACACCGTGGA ATTTCCCACT GGCGATGCTG
ACGCGCAAAT TAGGCCCTGC GCTGGCGGCC GGTTGCACCG CCGTGATCAA ACCCGCTAAC
GAGACACCGC TTTCCGCCTT TGCTTTGATC GTACTGGCTG AACTTGCCGG AGTACCGCCA
GGGGTGATTA ACGCCGTATC CGGTGATACT CCGGCTATCG GTGCCGCACT GATGGCCAGC
CCGCTGGTGC GAAAAGTGTC GTTTACCGGC TCCACCCCGG TCGGCAAACT GCTGATGCGC
CAGGCGGCGG ATACGGTGAA AAAACTGTCG CTGGAGTTGG GCGGCAATGC GCCGTTTATC
GTGTTCGACG ATGCCGATCT GGATGCCGCG GTGGCGGGCG CAATAGCGGC CAAATTCCGT
AACAGCGGCC AAACCTGCGT GTGCGTCAAT CGCTTCTACA TTCAGGACGG CATTTACGAC
CGTTTTGTCC AGCGGCTGAC CGATGCCGCG CGAGCATTGA AAGTGGCTCC CGGCATGACG
CCAGGCGCGC AGCAGGGCCC GTTAATCCAC CTGAAAGCAG TAGAAAAAGT GGAGGCTCAT
CTGCAGGATG CTATAAACCA GGGGGCGCGA CTGATGTGCG GTGGAGAACG CCACCTGCTT
GGAGGTTCCT TCTTCCAGCC AACGGTGTTG GCCGATGCCG ACGAACGGAT GCAGTTGGCG
CATGAGGAAA CTTTCGGCCC ACTGGCCGCC TGTTTCCGCT TCCACGATGA AGATGAGGCG
ATCCGCCGCG CCAATGACAC GCCCTTTGGG CTGGCGGCTT ACCTGTATAC CCGCGATTTG
GCGCGCGCAT TTCGTGTGAC GCGTCAGCTC GAAAGCGGCA TGGTTGGCAT CAACGAAGGC
ATCATTTCGA CCGAGGTCGC CCCGTTTGGC GGCGTCAAAG AGTCTGGACT GGGCCGTGAA
GGCGCTGCTA TTGGGCTTGA TGAGTATCTC GAAACCAAAT ACGTCAACCT CGGGCAACTT
GAGGGCGAAT AA
|
|---|
| Protein sequence | MTDYSSLLRN GWYCDGQWRT STQHYQVSNP ATGESVAEVA SVGSAETNEA ITAAAAALPA
WRALPAKARA QILQRWYQLI MENQAALAAL MVTEQGKVLS EAQGEVAYAA SFIEWFAEES
KRAYGQTIPA TKAGNQIITF KEPVGVIAAI TPWNFPLAML TRKLGPALAA GCTAVIKPAN
ETPLSAFALI VLAELAGVPP GVINAVSGDT PAIGAALMAS PLVRKVSFTG STPVGKLLMR
QAADTVKKLS LELGGNAPFI VFDDADLDAA VAGAIAAKFR NSGQTCVCVN RFYIQDGIYD
RFVQRLTDAA RALKVAPGMT PGAQQGPLIH LKAVEKVEAH LQDAINQGAR LMCGGERHLL
GGSFFQPTVL ADADERMQLA HEETFGPLAA CFRFHDEDEA IRRANDTPFG LAAYLYTRDL
ARAFRVTRQL ESGMVGINEG IISTEVAPFG GVKESGLGRE GAAIGLDEYL ETKYVNLGQL
EGE
|
|---|
| |