Gene Spro_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2456 
Symbol 
ID5602887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2690264 
End bp2691460 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content53% 
IMG OID640937995 
Productmajor facilitator transporter 
Protein accessionYP_001478685 
Protein GI157370696 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.298076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT CGTCGAGTGA CACACCACTT CACAATGAGC GCGCGTACTG GAGTGGCGTA 
TTCGCCATGA CATTGTGCGT CTTCACCTTA ATTGCTTCGG AATTTATGCC AGTCAGCCTA
CTGACACCAA TATCCGCGGA CCTGGCCGTG AGTGAGGGAC TGGTTGGTCA GGGGATCGCT
ATTTCCGGAC TTTTTGCCGT ATTGACGAGT CTCTCCATTT CTACGCTGGC TGGGGCTGCG
AATCGCAAAA TCTTGCTGTT GGGTATGACG GCCTTGATGG CGCTTTCCGG AGCCATCATA
GCGTTAGCGC CCAGCTATTT TATTTACATG GCTGGCCGAG CCCTGATTGG AATTGCTATT
GGTGGCTTCT GGTCACTATC GGCTGCCACG GCTATTCGCC TGGTTCCGCA ACATCGGGTA
CCTCGCGCAC TGGCTATTTT TAATGGGGGC AACGCGCTGG CCACTGTTAT AGCCGCTCCA
TTGGGGAGTT ATCTGGGTTC TGTCATCGGC TGGCGTGGCG CATTCTTTTG CATTGTGCCG
GTCGCGGTAA TTGCGTTTAT TTGGCAGTTG TTCAGCTTGC CGGCCATGAC TACGGATAAA
GACGCCAAGC GTAGCGGCAC TGTATTTCGC CTTTTTGCCA ATCCGTTGGT GACCCTTGGC
CTTGCCGCCT GTGGATTGTT CTTTATGGGC CAGTTTTCTT TGTTTACCTA TTTGCGTCCG
TTTCTTGAAA CGGTAACACG GGTGGATATC ACCACGCTGT CGCTCATTTT GCTGACCATC
GGGGTTGCGG GCTTTATCGG TACTTTGCTG ATTGGCATTT TCTTGAAATC CACCTTCTAT
CTGACGTTGA TCGCCATCCC ATTGCTGATG GCTGCCATAG CCGGAGCGCT GATCGCTTTT
GGCCACAGCG TCTGGATTGT CACACTGCTG CTGGGTTTAT GGGGGTTGTT CGCTACGGCT
GCTCCGACCG GTTGGTGGAC CTGGATCGCC AGAACATTGC CTGATGATGC GGAAGCCGGC
GGTGGGTTGA TGGTTGCCAT AGTGCAGCTG TCAATCGCAC TGGGTTCCAC CCTCGGTGGT
TTCGCATTTG ACCATAGCGG TTATCAAAGC ACTTTCACCA TCAGCATCGT TTTATTAGTG
ATCGCGGCTG CCCTGACTTT ATGGACGTCA CGTAAAGATC TCTACCAAAC CAATTGA
 
Protein sequence
MPRSSSDTPL HNERAYWSGV FAMTLCVFTL IASEFMPVSL LTPISADLAV SEGLVGQGIA 
ISGLFAVLTS LSISTLAGAA NRKILLLGMT ALMALSGAII ALAPSYFIYM AGRALIGIAI
GGFWSLSAAT AIRLVPQHRV PRALAIFNGG NALATVIAAP LGSYLGSVIG WRGAFFCIVP
VAVIAFIWQL FSLPAMTTDK DAKRSGTVFR LFANPLVTLG LAACGLFFMG QFSLFTYLRP
FLETVTRVDI TTLSLILLTI GVAGFIGTLL IGIFLKSTFY LTLIAIPLLM AAIAGALIAF
GHSVWIVTLL LGLWGLFATA APTGWWTWIA RTLPDDAEAG GGLMVAIVQL SIALGSTLGG
FAFDHSGYQS TFTISIVLLV IAAALTLWTS RKDLYQTN