Gene Spro_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2452 
Symbol 
ID5602811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2684993 
End bp2685958 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID640937991 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001478681 
Protein GI157370692 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.32424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTC ATTTGTTGAT CATTATCGAG CTGGCACCTG AATATTGGCA GCGCTTCGAG 
CTGGCGGGGT TTTGCGTACA CATCACTACA TCGATAGCGG TCTGGACGGC GCAAAGGCCA
GACGACATCG TCAAAGTAAA AGCCGTACTC ACCAACGGTT CAACCGGACT TCACGCCGAC
GAAATCGCCA TATTGCCGGG GTTGGAGATT ATCTGCGCCC AAGGTGCCGG TTATGAAAAT
GTCGATATTG TTGCGGCTCA GGCCCGTGGC ATCATTGTGA CTCATGGCCC AGGCACCAAT
GATGCTTCGG TGGCCGATCA CGCCATTGCA CTGTTGATGG CTATTGCCCG CGGGATCCCA
CAGGCCGATA CGGCAGTGCG CCGAGGGGAA TGGCAGCAGG CACGGCAAGT TCGGCCGATG
GTCTCCGGTA AGAAATTGGG CATTCTCGGC CTCGGGAATA TCGGTATGCA GATTGCCCGC
CGTGGGGAGA TGGGTTTTGG CATGTCGGTG GCTTATCACA ACCGCATGCC GCGTGCCGAT
ACGCCTTATC TTTATATTCC TACGGCCGCC GCCCTGGCCG AATGGGCGGA CTTTATGGTG
ATAGCCACTC CAGGCGGCAT AGCAACCCGC CATATCGTGG ATGCGGAGGT ACTGACTACC
CTTGGCCCAA ATGGGTTTCT GATCAATATC GCGCGAGGCA GCGTGGTGGA TACGCTGGCA
CTTATCGATG CTCTGGAGCA TCATCTCATC GCCGGTGCGG CCCTGGATGT GGTAGAAGGG
GAACCCGCAG TACCCCCGGA ATTAATCCAA CTTGCCAATG TGATTCTAAC GCCGCATATC
GCCGGGCGTT CCCCGGAGGC GATAGCGGCA ACGGTGCAGT TGGTACTCGA CAATCTCAAT
GCGCATTTCT CTGGGGAATC GGTGCTTACG CCGGTTGTTC CCCCAGGGCT TTTAACCAAG
CAATGA
 
Protein sequence
MNPHLLIIIE LAPEYWQRFE LAGFCVHITT SIAVWTAQRP DDIVKVKAVL TNGSTGLHAD 
EIAILPGLEI ICAQGAGYEN VDIVAAQARG IIVTHGPGTN DASVADHAIA LLMAIARGIP
QADTAVRRGE WQQARQVRPM VSGKKLGILG LGNIGMQIAR RGEMGFGMSV AYHNRMPRAD
TPYLYIPTAA ALAEWADFMV IATPGGIATR HIVDAEVLTT LGPNGFLINI ARGSVVDTLA
LIDALEHHLI AGAALDVVEG EPAVPPELIQ LANVILTPHI AGRSPEAIAA TVQLVLDNLN
AHFSGESVLT PVVPPGLLTK Q