| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2436 |
|---|
| Symbol | |
|---|
| ID | 5604149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2669114 |
|---|
| End bp | 2669908 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937975 |
|---|
| Product | hydrogenase nickel incorporation protein HypB |
|---|
| Protein accession | YP_001478665 |
|---|
| Protein GI | 157370676 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCAGTA CCTGCGGTTG TGCCCAGGGT GAATTAACCA TTGAAGGGGA TGTGAAGGTG
CCATTCCGTC CGCAACGCAA TGTGCAGGGC GATCTGCATT ACGGTTTGGG GCTGGCAGGC
ACCCATGCAC CGGGTATCAG CCAGCGCCGG ATGCTGGAAA TTGAAACCCG GGTGCTGGAT
AAGAACGATC GTCTGGCGGA GGGTAATCGC CAGTATTTCG CCGACCAACA TATTCTGGCG
CTGAATCTGG TTTCCAGCCC CGGCTCCGGC AAAACCACGC TGCTGACAGA AACGCTGCTG
CGGCTGCGGG GTCAGCACCC GTGCGCGGTG GTGGAAGGCG ATCAGCAAAC CACCAATGAC
GCGGAACGTA TCCGCGCCAC CGGTGTACCG GCTATTCAGG TCAATACCGG TAAAGGCTGC
CATCTGGATG CGCAAATGGT TCACGAGGCC GCCCGGCGTC TGGAACTCAA ACCCCACAGC
CTGTTGTTTA TCGAGAACGT CGGCAATCTG GTTTGCCCGG CCAGCTTTGA TCTGGGGGAG
CGCCACAAGG TAGCGGTGCT GTCGGTTACC GAAGGGGAAG ACAAACCCCT CAAGTATCCA
CATATGTTTG CCGCCGCACG GGTGATGCTG CTGAACAAAA TCGATCTGCT GCCGTATTTG
AACTTCGACC TGGCAGCCTG TATCGACAAT GCCCGCAAGG TGAACCCGAC GATTGAGGTG
ATTACCCTCT CGGCGACCAG CGGTGAAGGT ATGGATCAGT GGCTGGCCTG GCTGGAGACA
CAGTTATGTG CATAG
|
|---|
| Protein sequence | MCSTCGCAQG ELTIEGDVKV PFRPQRNVQG DLHYGLGLAG THAPGISQRR MLEIETRVLD
KNDRLAEGNR QYFADQHILA LNLVSSPGSG KTTLLTETLL RLRGQHPCAV VEGDQQTTND
AERIRATGVP AIQVNTGKGC HLDAQMVHEA ARRLELKPHS LLFIENVGNL VCPASFDLGE
RHKVAVLSVT EGEDKPLKYP HMFAAARVML LNKIDLLPYL NFDLAACIDN ARKVNPTIEV
ITLSATSGEG MDQWLAWLET QLCA
|
|---|
| |