| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2414 |
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| Symbol | |
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| ID | 5603156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2639927 |
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| End bp | 2642020 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640937953 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001478643 |
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| Protein GI | 157370654 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.216433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.76147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTT TACCCGAGTG CAATGATGGC AACCATCCTT TTGATATAGC TAATGAAATA
TTTGATGGTT TGCCGAATCT CATTGGCGTA GGTAATAGCC TCGGGGGACA TTTCAATAAA
TTGTGGTGTG AGTATTCCGG CCTGTCTTCA TATGATAACC GGAACACCGG CTGGTTGAAG
GCCTTGCACC CGGATGACTA TGCCCTGGTT GATTCGTTGT GTCAGCAAGC GATGACCACC
GCAACTTCTT TCGTTAAACA AGCCCGCCTG CGCCATTGCA GCGGTGAGTA TCATTGGTTT
CTGCTGTCGT TTGGTGTAAA AAAAGCCCCG AATTCCGCGC ATAACCATTG GTTTCTCAGC
TGTACCGATA TCCATCATCA AATGCTGGAA AAACAAATCA TTGCCGAAAA ACTGGCGGCG
CAGAAAAATA TGCTTGATGC CAGTGTCGAC TGTATCAAAG TGATTAATAA TGATGGTTCA
TTGCTGCATA TGAACAAAGC GGGCAGCATC GCTTTGGGTG TAGATGAGAA CCAGCAACAG
TTTGGCATGC CCTGGTTGGG TCTGCTGCAG CCAGAAGTTC GCCAGCGTGG CCAAAAAGCG
CTCCGCAAGG TGCTGAGCGG GAAAAATGCC AGATTCGCCG GCCTTAGCGC CACCCCGGAT
GGCAGACTGC AGCATTGGGA TAATATCCTT AGCCCGGTGT TCGACAAGGA CGCCCGGATA
CAAAATATAT TGTGCGTTTC GCGCGATGTC AGCTCTCAAC GGATAGCGGA AAAACGCTTA
CTGATCGCCA GTGAATATGA CGAACTGACC GGTTTGCCCA ACCGGCGATT ATTCAAGAAA
AGATTAAAAC AGGAAATGAA ACGCTCGCGG GCCAATAATA AATCGCTTGG GCTGATTTTG
CTGGATCTCG ATCACTTTAA GTTGGTCAAC GACACCCTGG GGCACGATGC CGGCGATCAT
CTGTTGCGTG TATTGGCCCG GCGGCTCAAG GCCGATTTGA ACGCTAACTC ATTTGTTTCC
CGATTGGGTG GCGATGAGTT TGCGGTAGTG ATCAGCGACG TCGAAAACGA ACAGGATATC
TTCAAAATCG CCAATAACTT TCTGCTGCAG CTTGAAACGC CAATTACCCA TGGCGGTAAA
GCACTTCATT GCGGCATGAG CATTGGTGGA GCCCTCTACC CGCAGGATGC CCGTGATGCG
TCAGAATTGA TGAAATGTGC CGATACCGCT CTGTACGAGC TTAAGGACGG CGGCCGTGGC
GGCGTTTATA TGTTTAATCC GCAGATGATG GATAAGGCCA GGGAACGTGC GACACAGCTT
AATCACGCAC GTCAAATTGT GCGTAACAAC CAGATCCGCC CCAGCTATCA GCCCAAGGTC
AATCTGGCAA CCGGTGCCAT TGTCGGCTTT GAGGCCCTGC TGCGCTGGTA TTGCCCGCAA
AATGGCATCC AGACGCCGGA TAGCGTCTGC GAAGCGTTTA ACGATTACGA ACTGGCAACC
AAAATCGGCG AAACCATGCA GATGAAAGTG TTTGCCGATA TCTCGGCCTG GCTTGCTTCT
GGTGCCGAAG TTTTGCCAGT GTCGCTGAAC GCTTCCCCTA TCGAATTTTT ACGTGATAGC
TACGCCGAAA CATTCCTTCA GCGCTTGCAG ATGTTTAATA TCCCTCACCA TCTGATTGAG
CTGGAAGTGA CCGAACATGC CTTTAATAAG CATGGCTCGA AGTATGTGCT GCGAGCTTTG
CAAATGCTCA AGGAAATGGG GATACGGATT GCGCTTGATG ATTTTGGCAC CGGGCACTCT
TCCTTTACCC ACCTGATGAA CTACCCACTG GACTGCATAA AACTGGATCG CGACTTTATC
CGCCGTATGA ATAACGAGAC GGCTATTCTA GGCATTGTGG AAAGCATGGG CATTTTGGGA
CAAAAATTAT CCATCGATAT CATTGCCGAA GGGATTGAAA CCGAGCAGCA GCGGCAAACG
CTGTGCAACT CCGGCTATCA TTTGGGCCAG GGTTTTCTGT TTAGCCAGGC CGTTGAGGCG
CCCCGTGCAC TCAGTATGTT GTTAAAGAGA CCCGCCCCCA AAATAACCGC TTGA
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| Protein sequence | MSVLPECNDG NHPFDIANEI FDGLPNLIGV GNSLGGHFNK LWCEYSGLSS YDNRNTGWLK
ALHPDDYALV DSLCQQAMTT ATSFVKQARL RHCSGEYHWF LLSFGVKKAP NSAHNHWFLS
CTDIHHQMLE KQIIAEKLAA QKNMLDASVD CIKVINNDGS LLHMNKAGSI ALGVDENQQQ
FGMPWLGLLQ PEVRQRGQKA LRKVLSGKNA RFAGLSATPD GRLQHWDNIL SPVFDKDARI
QNILCVSRDV SSQRIAEKRL LIASEYDELT GLPNRRLFKK RLKQEMKRSR ANNKSLGLIL
LDLDHFKLVN DTLGHDAGDH LLRVLARRLK ADLNANSFVS RLGGDEFAVV ISDVENEQDI
FKIANNFLLQ LETPITHGGK ALHCGMSIGG ALYPQDARDA SELMKCADTA LYELKDGGRG
GVYMFNPQMM DKARERATQL NHARQIVRNN QIRPSYQPKV NLATGAIVGF EALLRWYCPQ
NGIQTPDSVC EAFNDYELAT KIGETMQMKV FADISAWLAS GAEVLPVSLN ASPIEFLRDS
YAETFLQRLQ MFNIPHHLIE LEVTEHAFNK HGSKYVLRAL QMLKEMGIRI ALDDFGTGHS
SFTHLMNYPL DCIKLDRDFI RRMNNETAIL GIVESMGILG QKLSIDIIAE GIETEQQRQT
LCNSGYHLGQ GFLFSQAVEA PRALSMLLKR PAPKITA
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