Gene Spro_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2398 
Symbol 
ID5607437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2619610 
End bp2620302 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID640937937 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001478627 
Protein GI157370638 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATAG AGTATTTGCC GTTGCTGGCT CATGGCGCGT TGCTGTCACT GTGCGTGATG 
CTGGTTTCAC TGGCGGTGGC GTTGACGCTT GGCATGATCA ATGCGCTGAT TAAACTCTTT
GGTCCGCGCT GGTTGCGCTG GGTATCGACG GGTTACACCA CGCTGGTGCG CGGCATTCCC
GAGTTGGTGA TCATGCTGTT GCTGTTCTTT GGCGGCGAAA TGCTGGTCAA CGGCTTGCTT
GGCCTGGTGG GATTGGGGCC GCTGCGCTTC AACACCTTTA TCTCTGGGGT GCTGGCGATT
GGTTTTGTGT TTGGCGCTTA CTACACCGAA ACCTTTCGCG GGGCGTTTCT CACCGTGGAG
CGCGGTCAAC TCGAGGCGGC AATGGCCTAC GGCATGCGGC CGGGCCAGGT GTTTCGCCGG
GTGCTGCTGC CGCAGATGCT GAGCTTCGCC ATTCCCGGCA TCAACAACAA CTGGCTTGGG
CTGATGAAAG CCTCGGCGCT GGTGTCGATC CTCGGTCTGG AGGATATGGT TTGGCTGGCA
GAGCAGGCCG GGCGGGCCAC GCAAAAGCCT TTCCTGTTTT ATTTCCTGGT GGCGCTGATT
TATATGGCGA TTACCGCCGT CTCCAGTTGG GGTTTTAGCC GGTTGGCGCG GCGTTACGCG
TTGGCTTCCT CACATTCGGC AGGAGCACGC TGA
 
Protein sequence
MVIEYLPLLA HGALLSLCVM LVSLAVALTL GMINALIKLF GPRWLRWVST GYTTLVRGIP 
ELVIMLLLFF GGEMLVNGLL GLVGLGPLRF NTFISGVLAI GFVFGAYYTE TFRGAFLTVE
RGQLEAAMAY GMRPGQVFRR VLLPQMLSFA IPGINNNWLG LMKASALVSI LGLEDMVWLA
EQAGRATQKP FLFYFLVALI YMAITAVSSW GFSRLARRYA LASSHSAGAR