Gene Spro_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2397 
Symbol 
ID5607436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2618800 
End bp2619573 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content54% 
IMG OID640937936 
Productextracellular solute-binding protein 
Protein accessionYP_001478626 
Protein GI157370637 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CATTAGCGGT TTTACTGACC AGTCTGGCAT TAAGCGGCCC TGCGGCGGCT 
CAGACCTTCG ACACCATCAG TTTTGGCGTG GACGGCGGTT ATCCGCCGTT TGACGTGCTG
GCACCCAGCG GTGAGATCAC CGGTTTCGAC ATCGATATCG CCAATGCGCT GTGCACCCAG
CTGCATGCCA AATGCGTGTT CGTCAAACAG CCGTTCGAAA GCATGATTGC CGCGCTTAAC
GCCCATAAAT TCGATGCCAT TATTGCGTCG TTAACCATTA CCGATGAACG CAAGAAAGAG
GTGGATTTTA CCGACCGCTA TTACCGCAGT TCTGCCCAGT TGGTGGCACG TAAGGGCAGC
GCGTTACTGC CGGACGTTGC CAGCCTGAAA GGCAAAACCG TTGGCGTGCA AACCGGCTCG
ATCCATGAGG CCTATGCCAA ACAGCACTGG GGCGGGAAAG GGGTGAAAAT TGTCTCTTAC
GCCAACCAGG ATAACGTCTA TCTGGATCTG ATGTCCGGGC GCATTAACGC GTCACTGCAG
GACAACACTC AGGCCGCCAG CAGCTTTATC GATACCCCAC GCGGGCAGAA GTTTGCCTTC
GCCGGCCCGG TGATTGAAGA CAGCAGTATC TCCTCTGACG TTGGCATTGC GGTGGGTAAA
GACAATCCGG CGCTGCGCGA TGCGCTTAAC GGGGCCATCA AGGCGATCCG TGCCGACGGG
ACTTATGAAG CCATCCAGAA AAAATATTTT AGCTTCGACA TATATGGCAA CTAA
 
Protein sequence
MKKTLAVLLT SLALSGPAAA QTFDTISFGV DGGYPPFDVL APSGEITGFD IDIANALCTQ 
LHAKCVFVKQ PFESMIAALN AHKFDAIIAS LTITDERKKE VDFTDRYYRS SAQLVARKGS
ALLPDVASLK GKTVGVQTGS IHEAYAKQHW GGKGVKIVSY ANQDNVYLDL MSGRINASLQ
DNTQAASSFI DTPRGQKFAF AGPVIEDSSI SSDVGIAVGK DNPALRDALN GAIKAIRADG
TYEAIQKKYF SFDIYGN