Gene Spro_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2388 
Symbol 
ID5602554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2608589 
End bp2610058 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content41% 
IMG OID640937927 
Productmembrane attack complex component/perforin/complement C9 
Protein accessionYP_001478617 
Protein GI157370628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.593015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AATCATCCAA GGTTGAAGGT TTGTTTAGCT CATCTTTTAC TCGTGTTAAT 
GCTGTCCCTC TCCCGAGCGA TACTTTACCC GGCGTAGGTA TTATTGGTTG TGGCTACAAT
CCATTTTTAG CCTATGCAGA TGCTTCTGCT GTCCTGCATC CTATTCTCGA CTGGTCAAAA
TCTCAGTTTA ACGAAATTAC TATGAACGGT CAGCAATATC AATTACCTGA TGTGCTTCAG
GCGGTATGGC TCAGTAACCA GTCTTACGCA TCGGTAACGG GGAAATCGCT CCAAAGTTAT
TTAACTGAAT TGGCTAACAG TATTAAAGTA AGTGGTAACT ATGGCTTTTT TAGTGCCTCA
GCCACAAATG AATTTAGCGA CAGTTCATTG AGAAAGTCAG AAAATGAGTT TAGTCGATGT
CAGCAGTCAT TTGATTTGTG GTCAATTAGT ATCCCAGCCG ATATTGCAAG GTTGCAAAAC
TATGTTTCAG ATGATTTTAT AAAACTGATT AATGCAATAA ATCCAGAAAG TAAAGATTCA
ATAGCCACTG TATTCAACGT TTATGGCAGC CATGTTCTAA TGAGTGGTGT TATGGGCGGG
AAAGCTCACG TATCCGCCTC AGCAAACAAG TTAACACTCA CCCAAAAATT TGAGATGAGT
ACGATTGTTC AGGCTAAATA CGAACAACTA ACATCACAAC TTAGCGTCGA AGACAAACTT
AAGTATTCAG AAGCCTTCGA TAGTTTCAGC GAAAGCGGTA GTTACACATA TGATATTCTA
GGCGGTAGCC CTTCTTTAGG GGCGCTTGTT TTTAAAAATA ACTCGCAAGG TAGTAGTGAC
GATAATTTAA AAAATTGGAT ACAGTCTATT TCCAGTATGC CGGTGTTGAC CAAGTTCATA
GACCAAACCT CGTTAATGCC TGTATGGCTA TTGTGTGAAG ACAAGACAAA AGCCGATGCA
TTAAAAAAAT ATTACGATAA TACATGGTCA AAATCGCAGA TGGCCGTTGC CAGTCTCAGA
GCAAACTACA TCGACGAGCT GACATTTGTC CTGGGTGACA ACTCAGATAT CCCTGCTCCA
GTCGGATACA CTAAAGTTCC GATTGATCTT AATTCTGATG CTGGGGGTAA ATATGTCTAT
CTTTGCTATC ATGAAGCGCA GTTCACGCCA GTAAATGGCA AACAGCCGAT TGTTGATATC
CAAGTGCTCT ATGGTAGCCA GATGCCAGCG CCTGGATATA TAAAAATTGA TGTTGATTTG
AATAGCGGTG CTGGCGGGGA ATTTGTCTAC CTTTCATACA AAAAGGGAGA ACCAACGTCG
TCCGATGTAA TTAATAAAAT CACCGCTGTA TATGGAAAAA ATGAGTACGT CCCAACCCCA
TATGGATATA AACAAATTAG CGGTGACCTT AATGCTGGAG CAGGCGGTGA CTTTGTTTAC
CTCTGTACTT ACCAAGGTGG TACAGAATAA
 
Protein sequence
MKIESSKVEG LFSSSFTRVN AVPLPSDTLP GVGIIGCGYN PFLAYADASA VLHPILDWSK 
SQFNEITMNG QQYQLPDVLQ AVWLSNQSYA SVTGKSLQSY LTELANSIKV SGNYGFFSAS
ATNEFSDSSL RKSENEFSRC QQSFDLWSIS IPADIARLQN YVSDDFIKLI NAINPESKDS
IATVFNVYGS HVLMSGVMGG KAHVSASANK LTLTQKFEMS TIVQAKYEQL TSQLSVEDKL
KYSEAFDSFS ESGSYTYDIL GGSPSLGALV FKNNSQGSSD DNLKNWIQSI SSMPVLTKFI
DQTSLMPVWL LCEDKTKADA LKKYYDNTWS KSQMAVASLR ANYIDELTFV LGDNSDIPAP
VGYTKVPIDL NSDAGGKYVY LCYHEAQFTP VNGKQPIVDI QVLYGSQMPA PGYIKIDVDL
NSGAGGEFVY LSYKKGEPTS SDVINKITAV YGKNEYVPTP YGYKQISGDL NAGAGGDFVY
LCTYQGGTE