Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2388 |
Symbol | |
ID | 5602554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2608589 |
End bp | 2610058 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640937927 |
Product | membrane attack complex component/perforin/complement C9 |
Protein accession | YP_001478617 |
Protein GI | 157370628 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.593015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG AATCATCCAA GGTTGAAGGT TTGTTTAGCT CATCTTTTAC TCGTGTTAAT GCTGTCCCTC TCCCGAGCGA TACTTTACCC GGCGTAGGTA TTATTGGTTG TGGCTACAAT CCATTTTTAG CCTATGCAGA TGCTTCTGCT GTCCTGCATC CTATTCTCGA CTGGTCAAAA TCTCAGTTTA ACGAAATTAC TATGAACGGT CAGCAATATC AATTACCTGA TGTGCTTCAG GCGGTATGGC TCAGTAACCA GTCTTACGCA TCGGTAACGG GGAAATCGCT CCAAAGTTAT TTAACTGAAT TGGCTAACAG TATTAAAGTA AGTGGTAACT ATGGCTTTTT TAGTGCCTCA GCCACAAATG AATTTAGCGA CAGTTCATTG AGAAAGTCAG AAAATGAGTT TAGTCGATGT CAGCAGTCAT TTGATTTGTG GTCAATTAGT ATCCCAGCCG ATATTGCAAG GTTGCAAAAC TATGTTTCAG ATGATTTTAT AAAACTGATT AATGCAATAA ATCCAGAAAG TAAAGATTCA ATAGCCACTG TATTCAACGT TTATGGCAGC CATGTTCTAA TGAGTGGTGT TATGGGCGGG AAAGCTCACG TATCCGCCTC AGCAAACAAG TTAACACTCA CCCAAAAATT TGAGATGAGT ACGATTGTTC AGGCTAAATA CGAACAACTA ACATCACAAC TTAGCGTCGA AGACAAACTT AAGTATTCAG AAGCCTTCGA TAGTTTCAGC GAAAGCGGTA GTTACACATA TGATATTCTA GGCGGTAGCC CTTCTTTAGG GGCGCTTGTT TTTAAAAATA ACTCGCAAGG TAGTAGTGAC GATAATTTAA AAAATTGGAT ACAGTCTATT TCCAGTATGC CGGTGTTGAC CAAGTTCATA GACCAAACCT CGTTAATGCC TGTATGGCTA TTGTGTGAAG ACAAGACAAA AGCCGATGCA TTAAAAAAAT ATTACGATAA TACATGGTCA AAATCGCAGA TGGCCGTTGC CAGTCTCAGA GCAAACTACA TCGACGAGCT GACATTTGTC CTGGGTGACA ACTCAGATAT CCCTGCTCCA GTCGGATACA CTAAAGTTCC GATTGATCTT AATTCTGATG CTGGGGGTAA ATATGTCTAT CTTTGCTATC ATGAAGCGCA GTTCACGCCA GTAAATGGCA AACAGCCGAT TGTTGATATC CAAGTGCTCT ATGGTAGCCA GATGCCAGCG CCTGGATATA TAAAAATTGA TGTTGATTTG AATAGCGGTG CTGGCGGGGA ATTTGTCTAC CTTTCATACA AAAAGGGAGA ACCAACGTCG TCCGATGTAA TTAATAAAAT CACCGCTGTA TATGGAAAAA ATGAGTACGT CCCAACCCCA TATGGATATA AACAAATTAG CGGTGACCTT AATGCTGGAG CAGGCGGTGA CTTTGTTTAC CTCTGTACTT ACCAAGGTGG TACAGAATAA
|
Protein sequence | MKIESSKVEG LFSSSFTRVN AVPLPSDTLP GVGIIGCGYN PFLAYADASA VLHPILDWSK SQFNEITMNG QQYQLPDVLQ AVWLSNQSYA SVTGKSLQSY LTELANSIKV SGNYGFFSAS ATNEFSDSSL RKSENEFSRC QQSFDLWSIS IPADIARLQN YVSDDFIKLI NAINPESKDS IATVFNVYGS HVLMSGVMGG KAHVSASANK LTLTQKFEMS TIVQAKYEQL TSQLSVEDKL KYSEAFDSFS ESGSYTYDIL GGSPSLGALV FKNNSQGSSD DNLKNWIQSI SSMPVLTKFI DQTSLMPVWL LCEDKTKADA LKKYYDNTWS KSQMAVASLR ANYIDELTFV LGDNSDIPAP VGYTKVPIDL NSDAGGKYVY LCYHEAQFTP VNGKQPIVDI QVLYGSQMPA PGYIKIDVDL NSGAGGEFVY LSYKKGEPTS SDVINKITAV YGKNEYVPTP YGYKQISGDL NAGAGGDFVY LCTYQGGTE
|
| |