Gene Spro_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2348 
Symbol 
ID5603691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2560397 
End bp2561413 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content60% 
IMG OID640937887 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001478577 
Protein GI157370588 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTT GGAGCCTTAT CCGTCAGCGT TGCTGGGGGT TGGTGCTGGT GATGTTCGGG 
GTGTGCGTTA TCACCTTTAC CATTTCTCAC CTGATCCCCG GCGATCCGGC GCGGCTGCTG
GCCGGTGACC GCGCCAGCGA AGAAATTGTC CAGCATATTC GCCAGCAGCT AGGGTTGGAT
CAGCCGTTAT ATGTGCAATT TGGCCGCTAC GTGCTGGATC TGTTGCATGG CGATCTGGGA
ACTTCCATTC GCACCGGGCG ACCGGTACTG GAAGATCTGC GAGCCTTCTT TCCCGCCACG
CTGGAGCTGG CTTTTTGCGC CTTGTTGCTG GCAATCGCGC TGGGAGTGCC GCTCGGCGTG
GTATCGGCGG TTTATCGCAA TAAATGGCCC GATCATCTGG TGCGGTTACT GTCGGTGACC
GGTATCTCGA CCCCGGCATT CTGGCTGGGG CTGGGCGTCA TTATCCTTTT TTACGGCCAA
CTCAATCTGT TACCCGGCGG CGGCAGGCTG GACGACTGGC TGGATCCACC GACCCATATC
ACCGGCTTCT ACCTGCTCGA TTCCCTGTTG ACCGGCAATG GCGAAGCCTT CTGGAACAGC
CTGCAGCACC TGATTTTGCC GGCGCTGACC CTGGCCTTTG TTCACCTCGG GGTGGTGGCG
CGGCAAATTC GATCGGCGAT GCTGGAACAG TTGGGAGAAG ACTATATCCG CACTGCGCGC
GCCAACGGCC TTTCGCATTG GCGAGTGGTG CTCGGGCATG CGCTGCCCAA CGCCCTGATC
CCGTCGGTGA CGGTGTTGGG GCTGGCGCTG GGGGATTTAC TGTATGGCGC GGTACTGACC
GAAACGGTAT TCGCCTGGCC GGGTATGGGG GCCTATGTGG TGGACTCCAT TCAGGCGCTG
GATTTCCCGG CGGTAATGGG GTTTGCCGTG GTGGTGTCCT TCGCCTACGT GATGGTGAAT
TTGATCGTCG ATCTGCTTTA TCTGTGGATC GACCCGCGAA TGGGGCGCGA GGGATAA
 
Protein sequence
MNVWSLIRQR CWGLVLVMFG VCVITFTISH LIPGDPARLL AGDRASEEIV QHIRQQLGLD 
QPLYVQFGRY VLDLLHGDLG TSIRTGRPVL EDLRAFFPAT LELAFCALLL AIALGVPLGV
VSAVYRNKWP DHLVRLLSVT GISTPAFWLG LGVIILFYGQ LNLLPGGGRL DDWLDPPTHI
TGFYLLDSLL TGNGEAFWNS LQHLILPALT LAFVHLGVVA RQIRSAMLEQ LGEDYIRTAR
ANGLSHWRVV LGHALPNALI PSVTVLGLAL GDLLYGAVLT ETVFAWPGMG AYVVDSIQAL
DFPAVMGFAV VVSFAYVMVN LIVDLLYLWI DPRMGREG