Gene Spro_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2292 
Symbol 
ID5604784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2494477 
End bp2495949 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content60% 
IMG OID640937831 
Productmajor facilitator transporter 
Protein accessionYP_001478521 
Protein GI157370532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTT TACTCCGCCC GGCGCACTCA GCCATGAGTT TTTTTTCACG CGCCAGCGCG 
CTGCCGCTGC TGGTGGCGGG TGCCTTCTTT ATGGAAAACC TCGACGCCAC GGTGATTGTC
ACCGCCATGC CGCAGATGGC GGCGGCCTTC GGCGTAAGGC CGGTGGACAT GAACATTGGT
ATCTCGGCTT ATATTCTGAC GCTGACGGTG TTTATTCCTG CCAGTGGCTG GATTGCCAAC
CGCTTCGGCG CCCGCAATAT CTTTGCCGCC GCGGTGCTGA TTTTTACCCT GGCATCGGTG
CTGTGCGCCG CCAGCGTTAA CCTGCCCACC TTCACCGCCG CCCGGATTCT GCAAGGCTTC
GGGGGTGCGC TGATGGTGCC GGTGGGTCGC CTGGTGGTGC TACGTAACAC TGCCAAACCG
GATCTGATCA AGGCCATTGC CACCATTACC TGGCCAGGGC TGGTAGCCCC AATCCTCGGC
CCGCCGGTCG GCGGTTTTAT TACCACCTAC GCCTCGTGGC ACTGGATCTT TATTCTTAAC
GTGCCGCTGG GTATCGCCGC GCTGTGGCTG GCCTGGCGGC TGATCCCGCA GGAAGCGTCG
CAGAAAGGAG TGCCTTTTGA CGCACTCGGC TTCGTATTGA CCGGCATCGC CTGCTTCGGC
CTGATGTTCG GTCTGGATTT GATCAACCAC CCGCAACTGT CCTGGCTGGT GCCTGCACTG
TGTATTCTCG GCAGCCTGGC ATTAGGCACA CTGGCGGTTC GTCACGCCAA ACGCACCGAG
CACCCGCTGA TCAATCTTTG GGCGATGCGA ATAAAAAGTT ACGCCGTCAC CATTTGGGGT
GGCACGCTGT TCCGCATCGC CATTGGCGCC GTGCCCTTCC TGCTGCCGCT GCTGTTCCAG
ATCGGTTTTG GCCTGAACGC CTTCGACGCC GGGCTGCTGG TACTGGCGGT TTTTGCCGGG
AATCTGGTGA TGAAGCCGTT TACCTCGGCG GTGCTGTACC GTTTTCGCTT TCGCACCACG
CTGGTGGTCA ATGGTTTGTT GAACGCGGCC ACTATTTTCG CCTGCGCGCT GTTGACGCCA
CAGACCCCGA CCTGGCTGAT TCTGGCGCTG CTGTTCGTCA GCGGGCTAAC GCGGTCCATG
CAGTTCACCG CGCTCAATAC GCTGGCGTTT TCCGAAGTAC CGCAGCCACA GATGAATGGT
GCCAACACGC TGTTCAATGT GTCGCAGCAA ATGGGCAGCG GGCTGGGTAT CGCCATCGGC
GCACTGGCCC TGCGGCTGGC AGAAATGTTG ATGCCGCAAT CGGGCGAGCG CATCCCCCTG
GTCGATTTTC AGTGGGCATT TGTGGTCATC GGCGTGATTG CCCTGCTGGC CGTGGTTGAC
TGCTTTACCC TGAACGCCAA CGCCGGCAGC GAGGTTCGCC AGAGAAAACC GGCCGCCACG
GTGCCAAACT CCCCCCAACG ATTGCAAAAA TAA
 
Protein sequence
MLFLLRPAHS AMSFFSRASA LPLLVAGAFF MENLDATVIV TAMPQMAAAF GVRPVDMNIG 
ISAYILTLTV FIPASGWIAN RFGARNIFAA AVLIFTLASV LCAASVNLPT FTAARILQGF
GGALMVPVGR LVVLRNTAKP DLIKAIATIT WPGLVAPILG PPVGGFITTY ASWHWIFILN
VPLGIAALWL AWRLIPQEAS QKGVPFDALG FVLTGIACFG LMFGLDLINH PQLSWLVPAL
CILGSLALGT LAVRHAKRTE HPLINLWAMR IKSYAVTIWG GTLFRIAIGA VPFLLPLLFQ
IGFGLNAFDA GLLVLAVFAG NLVMKPFTSA VLYRFRFRTT LVVNGLLNAA TIFACALLTP
QTPTWLILAL LFVSGLTRSM QFTALNTLAF SEVPQPQMNG ANTLFNVSQQ MGSGLGIAIG
ALALRLAEML MPQSGERIPL VDFQWAFVVI GVIALLAVVD CFTLNANAGS EVRQRKPAAT
VPNSPQRLQK