Gene Spro_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2285 
Symbol 
ID5604808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2488569 
End bp2489849 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content62% 
IMG OID640937824 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_001478514 
Protein GI157370525 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.397915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.187437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT TGGTCCACCT GCACCACTAT CGCGCCCTGC TGCGCCGCCT GTTTATCGCC 
ATCTTTCTTG GTATTGCCGC TGCGTTGGTG GTTTGGCTGT TTCACCGTGC GATGCTCGGG
CTGGAATGGT TATTGCTCGA TCATGAAGAC GGCAGCCTGG TGGCCGCCGC CGCCGCATTG
CCCGGCTGGC GCAGAGCGTT AACCCCGGCG CTGGGTGGGC TGGCGGCAGG CCTGCTATTG
TGGGTTTATC AGCGCTATCA GCACCAGCGG CAGGTTGCTC CCACTGATTA TATGGAGGCG
ATCGAAACCG GTGATGGCCG CCTGGACGTC AGCGCCAGCC TGGTGAAATG CCTGGCCTCA
CTGCTGGTGG TCTCCAGCGG CAGCGCTATC GGCCGCGAGG GCGCGATGAT CCTGCTGGCG
GCATTGGTAG GTTCCGTCTT TGCCCAGCGC TTCACCCATG AGAAAGAGTG GAAACTGTGG
GTGGCCTGCG GTGCCGCAGC CGGTATGGCC AGCGCTTATC ACGCCCCACT GGCCGGCAGT
CTGTTTATCG CCGAAATTCT GTTTGGCACA CTGATGCTGG CCTCACTGGG TCCGGTGGTG
ATTGCCGCCG TCAGCGCCCT GCTGGTGACC AATCTGCTCA ACGGCGGCCA GGCGCCGCTG
TATCTGGTAG AGCCGCTGCC CGCCCCCTGG CCGGTGCAAT ATCTGTTGAT GGCACTGCTC
GGCGTTTTAG CCGGGGTCTG CGGCCCGTTG TTCCTGTGGG CAATGTCTTC TTCCGGTCGC
GCATTCCGTT CGCTACGGCT AAAACCGCCG CTGCAATTGG CGTTAGGGGG GCTGATTGTC
GGGCTGCTGT CGCTGCTGTT TCCTGAGGTA TGGGGCAATG GCTACAGTGT GGTGCAGGCG
CTGCTCAGTG CGCCCCCCGG CGTATTGCTG GTAGGCGCCA TTCTGATCTG CAAGTTGCTG
GCGGTGCTCG CCAGTAGCGG ATCCGGTGCG CCTGGCGGTG TGTTCACACC CACGCTGTTT
GTCGGAGCGG CGCTCGGTTC GTTAGTTGGG CAACTCTGCG CCATCTGGCC GGAGTTGGGC
AGTGCGGTAC CGATTCTGAT GGCGTTAACC GGCATGGCTA CGCTTTTGGC GGCCACCACC
CACGCGCCGA TAATGGCTGC GCTGATGGTG TTCGAAATGA CCGGTGAATA TACCCTGCTA
CCGGGGATCC TGTTGGCCTG TGTGATCGCC ACCACCGTCT CACGCGGTTT ACGTTCGGTG
TCGGTCTATC ACAACGCCTA A
 
Protein sequence
MKRLVHLHHY RALLRRLFIA IFLGIAAALV VWLFHRAMLG LEWLLLDHED GSLVAAAAAL 
PGWRRALTPA LGGLAAGLLL WVYQRYQHQR QVAPTDYMEA IETGDGRLDV SASLVKCLAS
LLVVSSGSAI GREGAMILLA ALVGSVFAQR FTHEKEWKLW VACGAAAGMA SAYHAPLAGS
LFIAEILFGT LMLASLGPVV IAAVSALLVT NLLNGGQAPL YLVEPLPAPW PVQYLLMALL
GVLAGVCGPL FLWAMSSSGR AFRSLRLKPP LQLALGGLIV GLLSLLFPEV WGNGYSVVQA
LLSAPPGVLL VGAILICKLL AVLASSGSGA PGGVFTPTLF VGAALGSLVG QLCAIWPELG
SAVPILMALT GMATLLAATT HAPIMAALMV FEMTGEYTLL PGILLACVIA TTVSRGLRSV
SVYHNA