Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2264 |
Symbol | |
ID | 5604937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2464528 |
End bp | 2465814 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640937803 |
Product | integrase family protein |
Protein accession | YP_001478493 |
Protein GI | 157370504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.12232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00139292 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGCTT ATCCAACGGG GGTGGAAAAT CATGGAGGAA CGCTCCGGAT CTGGTTCCTC TTCCAGGGGA AGAGAGTCCG GGAAAACCTT GGTATACCAG ACACGCCAAA AAACAGGAAA GCTGCTGGAG AATTGCGAAC CTCTGTTTGT TATGAAATAA AAACTGGCAA CTTTTCATAC GAAAAGAGGT TCCCAAACTC ACGCAACGTT ACAATCAACG CAGCGCGTGA AAACATAACG GTAAATGACA TCATTAAAAA ATGGTTAAAT CTGAAGGAAA TGGAGGTATC CAAAGGCACA TTGTATAGAT ATACATCACA TTGCGGGGTT ACCGCGTCAT ACCTAAATCC AGAAAGAAAA ATTAATGAAA TCAGGCAAGA GGACATTCTA CTCGCCAGAA AGAGAATGCT TACTGAACCT CAACAACCGA AGATACACGA AAAGCGAAAA TCCGTGCGTC AGGGAAGAGC GGTTCCAACT GTTAACTCTT ACATGTTTTG CATGAGGGCA ATTTTTGATT TTGCAGTCTC TAATGGGTAT ATCGCTAACA ACCCATTTGA AGGGGTGTCA CCACTCAAAA AACAGCGCCC CGCTCCGGAC CCACTCACTA AGGAAGAGTA CCAGCGCGTC ATTGTCAGCT GCCCTACCCA GCAGATGAGA AACATGATAA CGCTGGCCAT TAATACCGGT CTACGCCATG GGGAGCTTTA TGCTTTAGCA TGGGAAGACT TGGACACTCA GAATTGGACA ATCAGTATTA GCAGAAACCT CTCTCTAAAA GAGCATTTTA CTCTGCCAAA AACTGATGCT GGCATGAGGA CGATCCAGCT TACAACTGTC GCCATAGAGG CCATCAAGTC TCAAATGGCA CTGACAAGGT TGTCGAATGC TCACCGCGTG ACAGTAAACC TGCGAGAGTA TGGGAAAAAG AGGACAGATG ACTGCACGTT CATTTTTTCC CCCCGGATAA CATCCAGGAA CGGTTCTAGC GCGGATTGGT ACAGTCCGGG CGCGTTCAAT GGTGCTTGGA AAACCATTTT GCGCAAGGCC GGTGTAAAGC ACAGGAAATC TTACGAGACG AGACACACGT TTGCCTGCTG GGCGTTATCG TGTGGCGCTA ACCCAAATTT CGTTGCACAC CAGATGGGGC ATTCATCAGC ACAAATGCTC TACAATGTCT ATGGAAAATG GATGACAGAG AATAACGACC ACCAGGTGAA CATTTTAAAT GCCAGTTTTT CACAGAATGC CCCACAGGTG CCCCATGAGC AAATCATAAA CATCTAA
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Protein sequence | MKAYPTGVEN HGGTLRIWFL FQGKRVRENL GIPDTPKNRK AAGELRTSVC YEIKTGNFSY EKRFPNSRNV TINAARENIT VNDIIKKWLN LKEMEVSKGT LYRYTSHCGV TASYLNPERK INEIRQEDIL LARKRMLTEP QQPKIHEKRK SVRQGRAVPT VNSYMFCMRA IFDFAVSNGY IANNPFEGVS PLKKQRPAPD PLTKEEYQRV IVSCPTQQMR NMITLAINTG LRHGELYALA WEDLDTQNWT ISISRNLSLK EHFTLPKTDA GMRTIQLTTV AIEAIKSQMA LTRLSNAHRV TVNLREYGKK RTDDCTFIFS PRITSRNGSS ADWYSPGAFN GAWKTILRKA GVKHRKSYET RHTFACWALS CGANPNFVAH QMGHSSAQML YNVYGKWMTE NNDHQVNILN ASFSQNAPQV PHEQIINI
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