Gene Spro_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2260 
Symbol 
ID5604949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2460883 
End bp2461479 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content56% 
IMG OID640937799 
ProductNUDIX hydrolase 
Protein accessionYP_001478489 
Protein GI157370500 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.229118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000399165 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAACCA CCAAAGAACG GGTTCGCATT GTCGAAACCC GGGTGTTGTC CGATGACTGG 
TATCTGCTGA AAAAAACCAC CTTTGATTTT TTACGCCGCG ATGGCGTATG GCAGCGGCAA
AGTCGCGAAA CCTACGATCG CGGTGACGGC GCGACCATTT TGCTGTTCAA CCGGCAGGCG
CAGACGGTAG TGCTGACGCG TCAGTTTCGC TTCCCGGTGT TCGTCAACGG CCACGACGGC
ATGCTGATCG AGGCTGCCGC CGGTCTGTTG GACAACGCTT CGCCGGAGGA ACGTATTCGC
GCCGAAGCGG AAGAAGAAAC CGGCTATATC GTGCAGAACG TGCAAAAGGT ATTTGAAGCC
TATATGAGCC CAGGCTCCGT CACCGAGAAG TTGCATTTCT TTGTCGGTGA ATACCATGCC
GCCGACCGGG TCAGTGATGG CGGCGGGGTG GAAGCGGAAG GCGAAGACCT GGAGGTGATT
GAACTGCCAC TGACAGAGGC CTTGAGCGCT ATTGCGCAGG GGACCATCGT CGATGCCAAA
ACCATCATGC TGTTGCAGTT TGTCGCCCTG AATCACACCC TGAGGAATGT GTTATGA
 
Protein sequence
MITTKERVRI VETRVLSDDW YLLKKTTFDF LRRDGVWQRQ SRETYDRGDG ATILLFNRQA 
QTVVLTRQFR FPVFVNGHDG MLIEAAAGLL DNASPEERIR AEAEEETGYI VQNVQKVFEA
YMSPGSVTEK LHFFVGEYHA ADRVSDGGGV EAEGEDLEVI ELPLTEALSA IAQGTIVDAK
TIMLLQFVAL NHTLRNVL