| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2256 |
|---|
| Symbol | |
|---|
| ID | 5605074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2456977 |
|---|
| End bp | 2458344 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640937795 |
|---|
| Product | PTS system ascorbate-specific transporter subunit IIC |
|---|
| Protein accession | YP_001478485 |
|---|
| Protein GI | 157370496 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.23514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000139154 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCC TGATTGACTT TATCGTCAAG GACCTGCTCG GTCAGGCTTC GATCCTGATC
GCCTTTATTG CCATGCTGGG GCTGATACTG CAGAAAAAAT CCACCGGAAA AGTGGCCGAG
GGCACCTTTA AAACCCTGTT GGGCTTTCTG ATCATGATGG CGGGTATCAA CATTATTGTC
GGTGCCCTGA CCTATTTGAA CAGCATCTTC ACCCACGGCT TCGGCATGAC CGGCTACATC
ACCGACGTCG CCGCCATTGC CGGCCTGGCC AACCGCGAAC TCGGCTCGGA AGTGGCGATG
ACGCTGATGG TGATATTCGC GGTGAATATC ATTATTGCGC GTATCACCCC GTTCAAATAC
ATCTTCCTGA CCGGGCAAGC CTTGCTGTGG ATGGCCACCA TAGGGGCGGT GATCGGCTAT
AAAGCGGGGC TAACCGGCCT GCCGCTGATC CTGACCGGCG GCATATTTGG CGGCGTGATG
GCGGTGCTAA TGCCGGCCTT GGCACAGCCG GTGGTGCGCA AGATTACCGG TTCGGATGAT
GTCGCTTTGG GGCATTTCTG CACCATCGGC TATCTGGTGC AGGCGGCGGT CGCCAAAGTG
GTCGGTAAAG GATCCCGCTC AACCGAAGAT CTGGAACTGC CCGACAACTT CAAGTTCCTG
CAGGACACCT ACCTGTCGAT GGCGGTGGTG ATGATCCCGA TGTATCTGAT CCCCGCACTG
GCCGCCGGCC CGCAATACAT CGCCCAGTAT GCCGGCGGCA TGAATTATCT GATGTACTCC
TTTATGCAGG CCATCCAGTT TGTTGCCGGG GTATTTATCC TCTACAGCGG CGTGCGTCTG
CTGCTCAATG AGTTGGTCCC GGCCTTTCGC GGCATCGCCA TGCGCATCGT ACCGGACGCC
AAACCGGCAC TGGACTGCCC GGTACTGTTC CCCTACGCCC CTAACGCGGT GATCGTTGGC
TTCCTGGCCA CCACCCTGGG TTCCATCATC GGCATGATCG TTTTCCCGAT GTTCGGGCTG
GCGATGATCC TGCCCGGCCT GCTGACCAAC TTCTTCGCCG GGGGCACCGC AGGCATCTTC
GGCAATGCGC TTGGCGGCCG ACGCGGCGCC ATGATCGGCG GCGTGGTCCA CGGCCTGTTT
ATCACTTTCC TGCCCGCCAT TCTGGTGCCA ATGCTGGAAA GCTACGGTTT TGTCGGCGTG
ACCTTCAGCG ACTCCGACGT CATCAGTAGC GGCCTGGTGA TGGGGCATGC CTTCCAGGGT
AACTGGCTGT TCATCGCTCT GTTCATCATC TTCGTCACGC TGATTGCGTG GTTTGTTAAC
GGTAAATCAA CCAAGCACCA TGAGGAAAAA GTCCATGAAA CTCTATAA
|
|---|
| Protein sequence | MNSLIDFIVK DLLGQASILI AFIAMLGLIL QKKSTGKVAE GTFKTLLGFL IMMAGINIIV
GALTYLNSIF THGFGMTGYI TDVAAIAGLA NRELGSEVAM TLMVIFAVNI IIARITPFKY
IFLTGQALLW MATIGAVIGY KAGLTGLPLI LTGGIFGGVM AVLMPALAQP VVRKITGSDD
VALGHFCTIG YLVQAAVAKV VGKGSRSTED LELPDNFKFL QDTYLSMAVV MIPMYLIPAL
AAGPQYIAQY AGGMNYLMYS FMQAIQFVAG VFILYSGVRL LLNELVPAFR GIAMRIVPDA
KPALDCPVLF PYAPNAVIVG FLATTLGSII GMIVFPMFGL AMILPGLLTN FFAGGTAGIF
GNALGGRRGA MIGGVVHGLF ITFLPAILVP MLESYGFVGV TFSDSDVISS GLVMGHAFQG
NWLFIALFII FVTLIAWFVN GKSTKHHEEK VHETL
|
|---|
| |