Gene Spro_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2253 
Symbol 
ID5605085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2455357 
End bp2455794 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content52% 
IMG OID640937792 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001478482 
Protein GI157370493 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.74172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000199426 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATTA AACAACTGTT GATCGAGGCC GGAGCAATAC AGGTCGGCGT GCAGGAAACG 
GACTGGAAAA AGGTGATTGA GTTGGCGGCA CAGCCTTTGG TCGAGAACGG CTATATTCAC
CCTTCCTATC ACCAAGCGGT GATCAGTAAT ACGCTGGCCC ATGGCGCTTA TTATGTGTTT
GACGAAGGCA TTGCCATCCC CCATGCCCGG CCGGAATGCG GCGTGATTAA AGATTGTTTC
AGCATGGTGC TGCTGGATCA GCCTGTCGCC TTTCAGGACA GTGAAAAGGC CGATATTGTC
ATCCTGTTCG GCGCAACGGA CAGCAACCGG CATATTGAAG AAGGCATCCG GGCGATTGTC
GAGTTACTGG ACAACAAACA GCGGCTCGAT AAACTGCGCG CCGCCAAACT CTGGCAAGAG
GTGGTAGAAA TCTTATGA
 
Protein sequence
MTIKQLLIEA GAIQVGVQET DWKKVIELAA QPLVENGYIH PSYHQAVISN TLAHGAYYVF 
DEGIAIPHAR PECGVIKDCF SMVLLDQPVA FQDSEKADIV ILFGATDSNR HIEEGIRAIV
ELLDNKQRLD KLRAAKLWQE VVEIL