| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2248 |
|---|
| Symbol | |
|---|
| ID | 5605102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2450337 |
|---|
| End bp | 2451254 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640937787 |
|---|
| Product | DNA-binding transcriptional regulator AraC |
|---|
| Protein accession | YP_001478477 |
|---|
| Protein GI | 157370488 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000211757 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTATCATC GCATGGCACA GGAACCGCAA CCTAACCCGC TGTTGCCGGG TTACACCTTT
AACGCTTATC TGGTGGCGGG GCTGACGCCG ATTATGGCGG ACGGTCCGCT GGATTTCTTT
ATCGACCGCC CCGGCGGCAT GAAGGGCTAT ATTCTCAACC TGACCATCAA GGGCCAGGGC
AAGGTGTTTG ACGGTGAAGA TACCCTTTAC TGCAATCCTG GCGATCTGCT GCTGTTTCCG
CCCAAAGCGG CGCATTACTA CGGCCGTTCG CCGGACAGCG ACTGCTGGTA TCACCGCTGG
GTGTATTTCC GTCCGCGCGC CTACTGGGCC GACTGGCTGG AATGGCACAG CAAAACCCAT
GAAGTGGGGC GGCTGACCTT GCCGAACAAT AACCTGTTAC TGGAGTTCGA TCGGCTGTTC
GCCAATATCG AACAGACTCA GCGTTCCGGT CGCCGCTTTG CCGAAGAGCT GGGGATGAAC
CTGCTGGAGC GTCTGCTGTT GCGCGCGATG GAGGAAGACC CGCTCAGCCC ACAGAAAATT
ATGGATCCGC GAGTCATTGA GGCCTGCCAG TTTATCACCG GCAACCTGGC CGGCGAGCTG
CGGATTGACG AGGTGGCGCG CCATGTCTGT TTGTCACCAT CGCGGTTGGC GCATTTGTTC
CGCGAGCAGG TGGGCATCAA TATTCTGCGC TGGCGCGAAG ATCAGCGGGT GATCCGCGCC
AAGCTGCTGT TGCAGACTAC GCAGGAGTCG ATCGCCACCA TAGGTCGGGT GGTGGGTTAT
GACGATCAGC TGTACTTTTC CCGGGTATTT CGCAAGCGGG TGGGCGTTAG CCCGAGCGAT
TTCCGCCGCC GCAGCCTGGA GATAAACTAC CCGGCCAGAA ATCAACGTGA ACAGCCTTAT
GTGGCGGCCT CAAGTTAA
|
|---|
| Protein sequence | MYHRMAQEPQ PNPLLPGYTF NAYLVAGLTP IMADGPLDFF IDRPGGMKGY ILNLTIKGQG
KVFDGEDTLY CNPGDLLLFP PKAAHYYGRS PDSDCWYHRW VYFRPRAYWA DWLEWHSKTH
EVGRLTLPNN NLLLEFDRLF ANIEQTQRSG RRFAEELGMN LLERLLLRAM EEDPLSPQKI
MDPRVIEACQ FITGNLAGEL RIDEVARHVC LSPSRLAHLF REQVGINILR WREDQRVIRA
KLLLQTTQES IATIGRVVGY DDQLYFSRVF RKRVGVSPSD FRRRSLEINY PARNQREQPY
VAASS
|
|---|
| |