| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2201 |
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| Symbol | |
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| ID | 5605483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 2402654 |
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| End bp | 2403193 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640937740 |
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| Product | isopentenyl-diphosphate delta-isomerase, type 1 |
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| Protein accession | YP_001478430 |
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| Protein GI | 157370441 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.43573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000497991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATGAAA TGCTAATTCT GGTGGATGCT GATGATAATG CCATTGGCTC CCAAAGCAAA
ACGCGGGTAC ACCAACAGGG GTTACTGCAC CGGGCATTTT CAATTTTTAT CTTTGATAGC
CAGGGCCGCC TGCTGTTGCA ACAGCGGGCA TTCAGTAAGT ATCACTCGGC CGGGCTATGG
ACCAACAGTT GCTGTGGCCA CCCGCGCTGG GGTGAGTCAA CGCTGGCCGC GGCTCAGCGC
CGCCTGCAGG AAGAGATGGG GTTCAGCGCT GAGCTACAAC AAGTTTCCAG TTTTACCTAT
CAGGCTGCGG TACCCGGCGA TTTAATTGAG CACGAATTCG ATCATATCTA CGTCGGTTTA
TTTGACGGCA AGCCGCAGGG GGCGCCTGAA GAGGCCCATA GTTGGTCGTG GACTGATATT
CAGCAATTAA CGGATGAAAC AACGCGCAAT CCTGAAAAGT TTACCGTTTG GTTTCTCACG
ATAATGAAGG ATCTTGGCGC CAATGAAATG GAACGTTGGG CAAGGTTGGC TGCGAGTTAA
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| Protein sequence | MDEMLILVDA DDNAIGSQSK TRVHQQGLLH RAFSIFIFDS QGRLLLQQRA FSKYHSAGLW
TNSCCGHPRW GESTLAAAQR RLQEEMGFSA ELQQVSSFTY QAAVPGDLIE HEFDHIYVGL
FDGKPQGAPE EAHSWSWTDI QQLTDETTRN PEKFTVWFLT IMKDLGANEM ERWARLAAS
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