Gene Spro_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2172 
Symbol 
ID5605832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2369126 
End bp2370172 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content60% 
IMG OID640937708 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001478401 
Protein GI157370412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0984452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAA CAGATGAACT GCGGACCGCG CGCATCGACA GCCTCGTCAC GCCGCAAGAG 
CTGGCGGAGA AGTTGCCAAT CTCGGCGGAA ATCGCGGACA ACGTGACGGC CTCACGGCAG
CGAATTGAAA AAATTCTGAC CGGCGAAGAT CGTCGCCTGC TGGTGGTGAT CGGCCCCTGC
TCTATTCACG ATCTTGACGC CGCCATCGAT TATGCCGGCC GGTTGAATGC GCTGCGCATC
CGTTATCAGG ATCGCCTCGA AATCGTGATG CGCACCTATT TTGAAAAACC GCGCACCGTG
GTGGGCTGGA AAGGCCTGAT CTCCGATCCG GCGCTGGATG GCACCTTCCA GGTCAATCGC
GGGATCGAAA TGGCGCGTAG GCTGCTGCTG GAAGTGAACC AGCTCGGCCT GCCAACCGCC
ACCGAGTTCC TGGACATGGT GGTCGGCCAA TACATTGCTG ATTTGATCAG TTGGGGCGCG
ATTGGCGCAC GGACCACCGA AAGCCAGATC CACCGTGAAA TGGCTTCGGC ATTGTCCTGC
CCGGTGGGCT TTAAAAACGG CACCGACGGC AACACCCGTA TCGCGATTGA CGCCATTCGT
GCGGCCCGCG CCGGCCATAT GTTCCTGTCA CCGGACAAGC ACGGCCAGAT GACTATCTAT
CAGACCAGCG GCAATCCTTA TGGCCATATC ATCATGCGTG GCGGCAAGAC GCCGAACTAC
CACGCTACCG ATGTGGTCGC CGCCTGCGAC AGCCTGCGCG AATTCGATTT GCCGGAGCAA
CTGGTGATCG ACTTCAGCCA CGGCAACTGC CAGAAATTGC ATCGTCGCCA ACTGGAAGTG
GCCGAAAACG TCTGCCAGCA GATCCGCGCC GGTTCCGTCG CCGTTGCCGG CGTAATGGCA
GAAAGCTTCC TGGTGGAAGG CACCCAGAAA ATCGTTGCCG GTCAGCCACT GACCTATGGG
CAATCGATCA CCGACCCTTG CCTGAGCTGG TCCGACAGCG AACAGCTGCT GGCCATGCTG
GCCGATGCGG TAGACACCCG CTTCTGA
 
Protein sequence
MHKTDELRTA RIDSLVTPQE LAEKLPISAE IADNVTASRQ RIEKILTGED RRLLVVIGPC 
SIHDLDAAID YAGRLNALRI RYQDRLEIVM RTYFEKPRTV VGWKGLISDP ALDGTFQVNR
GIEMARRLLL EVNQLGLPTA TEFLDMVVGQ YIADLISWGA IGARTTESQI HREMASALSC
PVGFKNGTDG NTRIAIDAIR AARAGHMFLS PDKHGQMTIY QTSGNPYGHI IMRGGKTPNY
HATDVVAACD SLREFDLPEQ LVIDFSHGNC QKLHRRQLEV AENVCQQIRA GSVAVAGVMA
ESFLVEGTQK IVAGQPLTYG QSITDPCLSW SDSEQLLAML ADAVDTRF