| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2167 |
|---|
| Symbol | |
|---|
| ID | 5605839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2364082 |
|---|
| End bp | 2364912 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640937703 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001478396 |
|---|
| Protein GI | 157370407 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.579619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.13229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTT CATTGACCCG TCGTCTGGCG CTGTGCATTG CGCTGGCGTT GCCGTTCACC
GCTGCGGCGG CGGAACGTAT TGTCTCGATA GGCGGTGACG TCACCGAAAT TGCCTTCGCC
CTGGGCGCGG GCGATGAAGT GATAGCGCGA GACAGCACCA GCCTGCAGCC GGAAGCCGTT
AAAAAACTGC CGGACGTCGG TTACATGCGC CAGCTTAATG CCGAAGGTAT TTTGGCGCTG
AAACCCACGC TGGTGCTGAC CACCGAATTG GCCGAGCCGG CGCTGGTGCT CAAACAGCTG
GAAGAGAGTG GCGTTAAAGT AGTGCGCATT CCCGGCGATA CCACCTTGCA AAGCGTGCCG
GAAAAAATCG CTGTGATCGC CAGTGCGCTT CAGCGCACCG AGCAGGGCAA GCAGTTGAGC
ACCCGTTACC AGCAGCAATT GGCGGCGGTG AAAACCGATG CGTTGCCGGT CAGGGTGTTG
TTCGTCATGA GCCACGGCGG TATTACGCCC ATGGCCGCCG GGCAACACAC GGCCGCCGAC
GCGGTCATCA CCGCTGCGGG TCTGAAAAAC GCCATGCAAG GATTCAGCCG CTATCGCCCG
CTTTCGCAGG AAGGCGTGAT AGCCAGCGCG CCGGATTTGC TGCTGGTCAC CACCGACGGC
GTAAAAACGC TCGGCGGCGA ACAGGAGCTG TGGAAATTGC CTGGCATGGC ACTCACCCCG
GCGGGCAAAC AGCATCGCAT ACTGGTGGTT GACGATATGG CGCTGCTGGG CTTCGGGCTG
GAAACGCCCG CCGCGCTGGC CAAGCTGCGT CATGCGGCGG AGCAAAAGTA A
|
|---|
| Protein sequence | MKPSLTRRLA LCIALALPFT AAAAERIVSI GGDVTEIAFA LGAGDEVIAR DSTSLQPEAV
KKLPDVGYMR QLNAEGILAL KPTLVLTTEL AEPALVLKQL EESGVKVVRI PGDTTLQSVP
EKIAVIASAL QRTEQGKQLS TRYQQQLAAV KTDALPVRVL FVMSHGGITP MAAGQHTAAD
AVITAAGLKN AMQGFSRYRP LSQEGVIASA PDLLLVTTDG VKTLGGEQEL WKLPGMALTP
AGKQHRILVV DDMALLGFGL ETPAALAKLR HAAEQK
|
|---|
| |