Gene Spro_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2161 
Symbol 
ID5605880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2357728 
End bp2358192 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content53% 
IMG OID640937697 
ProductNLP/P60 protein 
Protein accessionYP_001478390 
Protein GI157370401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.854022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGC GTATTTGGTT TTTATTAGCC AGTTTAATTC TTGCCGGTTG TAGCAGCCAT 
GCGCCGCCGC CGAGCGGCAA ATTGGCCGAT TCGATTGTGG TTGTTGCTCA GTTAAACGAA
CAGCTGCGTC AATGGTACGG CGCCCCTTAT CGCTATGGCG GGTTAGACCG CGGTGGCGTC
GACTGCTCCG GGTTTGTTTA TCGCACCTTC AGCGATCGTT TCGATATGCA ATTACCACGC
TCTACTGAAG AGCAAACCTC GCTGGGAACC AAAGTCTCGC GCGATGAGCT GATGCCCGGC
GATCTGGTGT TTTTCAAAAC CGGTGGCGGT GAGAATGGTT TGCACGTTGG CATTTATGAC
ACTAACGATC AGTTTATCCA TGCCTCAACC AGCCGCGGCG TGATACGTTC CTCGCTGAAC
AACGTCTACT GGAAGAAGGT CTACTGGCAG GCGCGTCGCA TTTAG
 
Protein sequence
MRMRIWFLLA SLILAGCSSH APPPSGKLAD SIVVVAQLNE QLRQWYGAPY RYGGLDRGGV 
DCSGFVYRTF SDRFDMQLPR STEEQTSLGT KVSRDELMPG DLVFFKTGGG ENGLHVGIYD
TNDQFIHAST SRGVIRSSLN NVYWKKVYWQ ARRI