Gene Spro_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2123 
Symbol 
ID5606127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2318847 
End bp2320238 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content58% 
IMG OID640937659 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001478352 
Protein GI157370363 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00153943 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000144884 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATCTTC CGCTGGTTAT TAACGTGGTG ATTTTTGTCG CCCTCCTTTT GCTGTTGGCG 
CAAAGCCGTC ATAAGCAATG GAGCCTGGCG AAAAAAGTAC TGGTCGGCCT GGTCATGGGC
GTGGTGTTCG GTCTGGCGCT GCAACTGGTG TACGGCTCGG ACAACCCGGT ACTGAAAGAA
TCCATCAGCT GGTTCAACAT TGTCGGTAAC GGCTATGTGC AACTGCTGCA AATGATTGTG
ATGCCGCTGG TGTTCGCCTC AATTCTGAGC GCGGTCGCCA AGCTGCACAA CGCCTCTTCT
CTGGGGAAAA TCAGCTTCCT GACTATCGGC ACCCTGTTGT TCACCACGCT GATTTCGGCG
CTGGTGGGCG TGCTGGTGAC CAACCTGTTT GGTCTGACCG CCGAGGGTCT GGTGCAAGGG
GCGCAAGAAA GCGCGCGTCT GTCAGCGATC CAAAGCAACT ACGTCGGTAA ACTGGCCGAC
CTGACCGTAC CGCAGATGGT GCTGTCGTTT ATTCCTAAAA ACCCGTTTGC CGATCTGACC
GGGGCCAGCC CAACCTCAAT CATCAGCGTG GTGATCTTCG CGACCTTCCT CGGCGTGGCG
TCGCTGCAGT TGCTGAAAGA CGACAAGCCT AAAGGCGAAC GCGTGCTGGT GGCGATCGAT
ACCCTGCAGG CCTGGGTAAT GAAGCTGGTG CGTCTGGTGA TGAAACTAAC TCCGTACGGC
GTACTGGCAC TGATGACCAA AGTGGTCGCC GGCTCTAACG TCCACGACAT CATCAAACTG
GGTAGCTTCG TCGTCGCCTC CTATCTGGGT CTGGCGATCA TGTTTGCCGT GCACGCCGCC
CTGCTGGCCT TCACCGGCGT TAACCCGTTG AAGTTCTTCC GCAAAGTATG GCCGGTGATC
ACCTTCGCCT TTACCAGCCG CTCCAGCGCC GCCAGCATTC CACTGAACGT GGAAGCGCAG
ACCCGTCGTT TGGGCGTACC GGAATCCATT GCCAGCTTCT CGGCCTCGTT TGGTGCCACT
ATCGGCCAGA ACGGCTGTGC CGGTCTCTAC CCGGCCATGC TGGCGGTAAT GGTAGCCCCA
ACCGTCGGTA TTAATCCGCT GGACCCGGTG TGGATCGCCA CCCTGGTCGG TATCGTCACC
ATCAGCTCCG CCGGCGTTGC CGGTGTCGGT GGCGGTGCGA CTTTCGCCGC GCTGATCGTG
CTACCGGCGA TGGGCCTGCC AGTTACGCTG GTTGCGCTGC TGATCTCGGT TGAACCGCTG
ATCGACATGG GCCGTACCGC ACTGAACGTC AACGGCTCTA TGGCTGCCGG TACCATCACC
AGTCAGTTGA TGAAGCAAAC CGACAAGTCC ATTATGGACA GCGAAGACGA AGTGGAACTG
GCTCACCAGT AA
 
Protein sequence
MNLPLVINVV IFVALLLLLA QSRHKQWSLA KKVLVGLVMG VVFGLALQLV YGSDNPVLKE 
SISWFNIVGN GYVQLLQMIV MPLVFASILS AVAKLHNASS LGKISFLTIG TLLFTTLISA
LVGVLVTNLF GLTAEGLVQG AQESARLSAI QSNYVGKLAD LTVPQMVLSF IPKNPFADLT
GASPTSIISV VIFATFLGVA SLQLLKDDKP KGERVLVAID TLQAWVMKLV RLVMKLTPYG
VLALMTKVVA GSNVHDIIKL GSFVVASYLG LAIMFAVHAA LLAFTGVNPL KFFRKVWPVI
TFAFTSRSSA ASIPLNVEAQ TRRLGVPESI ASFSASFGAT IGQNGCAGLY PAMLAVMVAP
TVGINPLDPV WIATLVGIVT ISSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISVEPL
IDMGRTALNV NGSMAAGTIT SQLMKQTDKS IMDSEDEVEL AHQ