Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2123 |
Symbol | |
ID | 5606127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2318847 |
End bp | 2320238 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937659 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001478352 |
Protein GI | 157370363 |
COG category | [R] General function prediction only |
COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00153943 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000144884 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATCTTC CGCTGGTTAT TAACGTGGTG ATTTTTGTCG CCCTCCTTTT GCTGTTGGCG CAAAGCCGTC ATAAGCAATG GAGCCTGGCG AAAAAAGTAC TGGTCGGCCT GGTCATGGGC GTGGTGTTCG GTCTGGCGCT GCAACTGGTG TACGGCTCGG ACAACCCGGT ACTGAAAGAA TCCATCAGCT GGTTCAACAT TGTCGGTAAC GGCTATGTGC AACTGCTGCA AATGATTGTG ATGCCGCTGG TGTTCGCCTC AATTCTGAGC GCGGTCGCCA AGCTGCACAA CGCCTCTTCT CTGGGGAAAA TCAGCTTCCT GACTATCGGC ACCCTGTTGT TCACCACGCT GATTTCGGCG CTGGTGGGCG TGCTGGTGAC CAACCTGTTT GGTCTGACCG CCGAGGGTCT GGTGCAAGGG GCGCAAGAAA GCGCGCGTCT GTCAGCGATC CAAAGCAACT ACGTCGGTAA ACTGGCCGAC CTGACCGTAC CGCAGATGGT GCTGTCGTTT ATTCCTAAAA ACCCGTTTGC CGATCTGACC GGGGCCAGCC CAACCTCAAT CATCAGCGTG GTGATCTTCG CGACCTTCCT CGGCGTGGCG TCGCTGCAGT TGCTGAAAGA CGACAAGCCT AAAGGCGAAC GCGTGCTGGT GGCGATCGAT ACCCTGCAGG CCTGGGTAAT GAAGCTGGTG CGTCTGGTGA TGAAACTAAC TCCGTACGGC GTACTGGCAC TGATGACCAA AGTGGTCGCC GGCTCTAACG TCCACGACAT CATCAAACTG GGTAGCTTCG TCGTCGCCTC CTATCTGGGT CTGGCGATCA TGTTTGCCGT GCACGCCGCC CTGCTGGCCT TCACCGGCGT TAACCCGTTG AAGTTCTTCC GCAAAGTATG GCCGGTGATC ACCTTCGCCT TTACCAGCCG CTCCAGCGCC GCCAGCATTC CACTGAACGT GGAAGCGCAG ACCCGTCGTT TGGGCGTACC GGAATCCATT GCCAGCTTCT CGGCCTCGTT TGGTGCCACT ATCGGCCAGA ACGGCTGTGC CGGTCTCTAC CCGGCCATGC TGGCGGTAAT GGTAGCCCCA ACCGTCGGTA TTAATCCGCT GGACCCGGTG TGGATCGCCA CCCTGGTCGG TATCGTCACC ATCAGCTCCG CCGGCGTTGC CGGTGTCGGT GGCGGTGCGA CTTTCGCCGC GCTGATCGTG CTACCGGCGA TGGGCCTGCC AGTTACGCTG GTTGCGCTGC TGATCTCGGT TGAACCGCTG ATCGACATGG GCCGTACCGC ACTGAACGTC AACGGCTCTA TGGCTGCCGG TACCATCACC AGTCAGTTGA TGAAGCAAAC CGACAAGTCC ATTATGGACA GCGAAGACGA AGTGGAACTG GCTCACCAGT AA
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Protein sequence | MNLPLVINVV IFVALLLLLA QSRHKQWSLA KKVLVGLVMG VVFGLALQLV YGSDNPVLKE SISWFNIVGN GYVQLLQMIV MPLVFASILS AVAKLHNASS LGKISFLTIG TLLFTTLISA LVGVLVTNLF GLTAEGLVQG AQESARLSAI QSNYVGKLAD LTVPQMVLSF IPKNPFADLT GASPTSIISV VIFATFLGVA SLQLLKDDKP KGERVLVAID TLQAWVMKLV RLVMKLTPYG VLALMTKVVA GSNVHDIIKL GSFVVASYLG LAIMFAVHAA LLAFTGVNPL KFFRKVWPVI TFAFTSRSSA ASIPLNVEAQ TRRLGVPESI ASFSASFGAT IGQNGCAGLY PAMLAVMVAP TVGINPLDPV WIATLVGIVT ISSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISVEPL IDMGRTALNV NGSMAAGTIT SQLMKQTDKS IMDSEDEVEL AHQ
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