Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2119 |
Symbol | |
ID | 5606137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2313038 |
End bp | 2315074 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640937655 |
Product | carboxy-terminal protease |
Protein accession | YP_001478348 |
Protein GI | 157370359 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000159277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000525254 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACAAAT TTGTCAGATT AACAGCAGTC GCGGGTCTGT TGTGGGCGGG TGTCAGTTAC GGAGCGGAAC CAGCCAACAT CCGCATCGAT CAACTGCCTC AGCTGCAGCA GGAACCGCAA CATGCAACTG TGAGTGAGCG CGTAACTTCG CGCTTCACTC GCTCTCATTA CCGTCAGTTT TCCCTCGACG CGGACTTTTC AGGCAAGATC TTCGATCGTT ATCTGAATAT GCTGGACTAC AGCCATAACG TGCTGCTGGC CTCCGACGTG GCGCAATTCG CCAACAAGCG CAATCAGCTG GGCGAAGAAC TGAAAAGCGG TAAGCTCGAT ACGCCATACG CGCTGTACAA TCTGGCGCAG AAACGCCGTT TTGAGCGTTA CACCTATGCA TTGTCGCTGC TGGAAAAGCC AATGAGCTTC ACCGGCAACG ACACTATTGA TCTCGACCGC AGCAAAGCGC CGTGGCCGAA AGACAAGGCC GAACTGGACG CGCTGTGGAA TGCGAAAGTC AAATATGACG AGCTGAACCT CAAGCTGACC GGCAAGACCG ACAAGGAAAT TCGTGAAACG CTGACCAAGC GCTATCAGTT TGCCATCAAG CGCCTGACGC AAAGCAACAG CGAAGACGTT TTCCAACTGG CGATGAATGC CTTTGCGCAT GAAATCGACC CGCATACCAA CTATCTCTCC CCACGCAATA CCGAACAGTT CAATACCGAG ATGAGCCTGT CGCTGGAAGG TATCGGTGCG GTGTTGCAGA TGGATGACGA TTACACCCTG ATCAACTCCA TGGTGCCAGG TGGCCCGGCG GCGAAGAGCA AGGCGATCAC CGTGGGTGAC CGTATTGTCG GCGTTGGCCA GGCGGGCAAG CCTGTGGTCG ATGTGATCGG CTGGCGTCTG GACGACGTGG TTTCCCTGAT TAAAGGGCCG AAGGGCAGCA AGGTGCGCCT GGAGATCCTG CCGGCCGGCA AGGGCACTAA AACCCGAGTG GTCACCTTGA CCCGTGAGCG TATCCGTCTG GAAGACCGCG CGGTGAAAAT GACCATCAAG ACCGTCGGCA AAGAGAAAGT CGCGGTGATG GACATTCCGG GCTTCTACGT GGGCCTGACC GATGACGTGA AAGTTCAGTT GCAGAAGATG GCCAAGCAGA ACGTCAAGAG CCTGATCATC GACCTGCGCA CTAACGGCGG CGGCGCACTG ACCGAAGCGG TTTCGCTGTC CGGTCTGTTC ATTCCGAGCG GCCCGGTAGT GCAGGTACGT GACAACAACG GTAAAGTGCG TGAAGACGCG GACACCGACG GCGTGACCTA TTACAAGGGG CCGCTGGTGG TACTGGTTGA CCGTTTCAGC GCCTCGGCTT CGGAGATCTT CGCCGCGGCA ATGCAGGACT ATGGTCGCGC GCTGATCGTC GGTGAACCGA CCTTCGGGAA AGGCACCGTG CAGCAGTATC GCTCGCTGAA CCGCATTTAC GATCAGATGC TGCGTCCGGA GTGGCCGGCG TTGGGGTCGG TGCAATACAC CATACAGAAG TTCTACCGCG TTAACGGCGG CAGTACCCAA CGTAAGGGGG TTACCCCGGA TATCCTGATG CCGAGCGGCA TTGATCCGGC GGAAACCGGT GAAGCGTTTG AAGATAACGC TATGCCGTGG GACAGCATCA ATGCGGCGAC CTACACCAAA ACCGGTGACA TGAAGCCGTT TGAGCCTGAA CTGCTGAAGG ATCATGAGCA GCGTATCGCC AAGGATCCCG AGTTCCAGTA CATCGCGCAG GATATCGCTC ATTACAAGGC GCTGAAGGAC AAGCGTAACA TCGTCTCTCT CAACCTGGTT CAGCGCGAGA AAGAGAACCA CGATGATGAC GCTACCCGTC TGCAACGTGT TAATGATCGC CTGCAGCGCG CCGGTAAAAA GCCGCTGAAG GCCCTGGAAG ATTTGCCGAA GGATTACCAG GAACCTGACC CATATCTGGA TGAAACCGTG CACATCGCAC TGGATCTGGC GCACCTTGAT CAGGCGCAGC CGGCGGCGGC GAAATAA
|
Protein sequence | MNKFVRLTAV AGLLWAGVSY GAEPANIRID QLPQLQQEPQ HATVSERVTS RFTRSHYRQF SLDADFSGKI FDRYLNMLDY SHNVLLASDV AQFANKRNQL GEELKSGKLD TPYALYNLAQ KRRFERYTYA LSLLEKPMSF TGNDTIDLDR SKAPWPKDKA ELDALWNAKV KYDELNLKLT GKTDKEIRET LTKRYQFAIK RLTQSNSEDV FQLAMNAFAH EIDPHTNYLS PRNTEQFNTE MSLSLEGIGA VLQMDDDYTL INSMVPGGPA AKSKAITVGD RIVGVGQAGK PVVDVIGWRL DDVVSLIKGP KGSKVRLEIL PAGKGTKTRV VTLTRERIRL EDRAVKMTIK TVGKEKVAVM DIPGFYVGLT DDVKVQLQKM AKQNVKSLII DLRTNGGGAL TEAVSLSGLF IPSGPVVQVR DNNGKVREDA DTDGVTYYKG PLVVLVDRFS ASASEIFAAA MQDYGRALIV GEPTFGKGTV QQYRSLNRIY DQMLRPEWPA LGSVQYTIQK FYRVNGGSTQ RKGVTPDILM PSGIDPAETG EAFEDNAMPW DSINAATYTK TGDMKPFEPE LLKDHEQRIA KDPEFQYIAQ DIAHYKALKD KRNIVSLNLV QREKENHDDD ATRLQRVNDR LQRAGKKPLK ALEDLPKDYQ EPDPYLDETV HIALDLAHLD QAQPAAAK
|
| |