Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2117 |
Symbol | |
ID | 5606135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2311715 |
End bp | 2312212 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640937653 |
Product | putative GAF sensor protein |
Protein accession | YP_001478346 |
Protein GI | 157370357 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00785932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000244904 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAAAG AACAATTCTA CGCGGAATTA AAACGTGATT TGTGCGCGCT GCTCGACGGG GAAACCAACT TTATCGCCGC GTTGTCCAAC GCCAGTGCGC TGATCAACGA GCGCCTTGAC GACGTTAACT GGGTTGGATT TTACCTGATG GACGGCACCC AACTGGTGCT GGGTCCTTTC CAGGGAAAAA TCGCCTGTGT GCGCATTCCG GTAGGCAAGG GAGTATGCGG CAGCGCCGTG GCGGAAAATC GCGTGCAGCG CGTTGGCGAT GTCCATGAGT TCCCTGGTCA TATCGCCTGT GACGCGGCCA GTAATGCAGA AATTGTGCTG CCGCTCAACG TTGGCGGTCA GATTATCGGC GTTCTCGATA TCGACAGCAC AGTTTATCAA CGTTTCGACG AACAGGACGA AAGGGGCCTG GAAGCAGTGG TGGCGGGGCT TTGCGCGCAG CTGGAACAGT GTGATAGTGC GAAATATGTC ACTGTAACGG CAAGTTGA
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Protein sequence | MTKEQFYAEL KRDLCALLDG ETNFIAALSN ASALINERLD DVNWVGFYLM DGTQLVLGPF QGKIACVRIP VGKGVCGSAV AENRVQRVGD VHEFPGHIAC DAASNAEIVL PLNVGGQIIG VLDIDSTVYQ RFDEQDERGL EAVVAGLCAQ LEQCDSAKYV TVTAS
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