Gene Spro_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2117 
Symbol 
ID5606135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2311715 
End bp2312212 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content55% 
IMG OID640937653 
Productputative GAF sensor protein 
Protein accessionYP_001478346 
Protein GI157370357 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00785932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000244904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAAAG AACAATTCTA CGCGGAATTA AAACGTGATT TGTGCGCGCT GCTCGACGGG 
GAAACCAACT TTATCGCCGC GTTGTCCAAC GCCAGTGCGC TGATCAACGA GCGCCTTGAC
GACGTTAACT GGGTTGGATT TTACCTGATG GACGGCACCC AACTGGTGCT GGGTCCTTTC
CAGGGAAAAA TCGCCTGTGT GCGCATTCCG GTAGGCAAGG GAGTATGCGG CAGCGCCGTG
GCGGAAAATC GCGTGCAGCG CGTTGGCGAT GTCCATGAGT TCCCTGGTCA TATCGCCTGT
GACGCGGCCA GTAATGCAGA AATTGTGCTG CCGCTCAACG TTGGCGGTCA GATTATCGGC
GTTCTCGATA TCGACAGCAC AGTTTATCAA CGTTTCGACG AACAGGACGA AAGGGGCCTG
GAAGCAGTGG TGGCGGGGCT TTGCGCGCAG CTGGAACAGT GTGATAGTGC GAAATATGTC
ACTGTAACGG CAAGTTGA
 
Protein sequence
MTKEQFYAEL KRDLCALLDG ETNFIAALSN ASALINERLD DVNWVGFYLM DGTQLVLGPF 
QGKIACVRIP VGKGVCGSAV AENRVQRVGD VHEFPGHIAC DAASNAEIVL PLNVGGQIIG
VLDIDSTVYQ RFDEQDERGL EAVVAGLCAQ LEQCDSAKYV TVTAS