| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2116 |
|---|
| Symbol | |
|---|
| ID | 5606158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2310221 |
|---|
| End bp | 2311471 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640937652 |
|---|
| Product | PqiA family integral membrane protein |
|---|
| Protein accession | YP_001478345 |
|---|
| Protein GI | 157370356 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.327223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000761316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA TACACGCGAT CACCGGCCCG CTATCCAAAG CACGCCACCA GCGCTGTTGC
GAATGCGACC TGCTGTTTGT ATTGCCGCCA CTGAGCGGCA AACAGGCGGC CTACTGCCCG
CGCTGCGATG CCAAGGTGGT CAGTGGCCGT GACTGGTCGA TGACCCGACT GACCGCCATG
GCGGTCACCA TGCTGCTGTT GATGCCCTTC GCTTTCAGCC AGCCGCTGAT CAGCATCCGC
CTGCTGGGGG TGCGCATTGA CGCCAGCCTG CTGGAAGGCA TCTGGCAGAT GAGCCACCAG
GGGGATCCTC TCACCGCCAG CATGGTGGCG TTTTGCACTA TTGGCGCCCC GCTGACGCTG
GCGCTGTCGC TGCTTTACCT GCGTTTCGGC CACGCACTGG GCATGAACCT GCGCCCGGTA
CTGCTGATGC TCGATCGCTT GAAAGAGTGG GTGATGCTCG ATATTTACCT GATCGGCATG
GCGGTGGCGA CAATCAAAGT AAAAGAATAC GCCGATATCC AGGCCGGCAG TGCGCTGATC
GCTTACCTGG CGCTCACCCT GCTCAGCATC CTGACGCTGA TCCACGTCAA TCTGGAACAG
CTGTGGGAAC GCTATTATCC GCAGGAACAG CCGAAAGGCC TGCCAACGGC GCTGCATATC
TGCCTGTCCT GCCATTTCAC CGGTTACCCA GACCAGCGTG GTCGCTGTCC ACGATGCCAC
ATTCCGATGT GCCGTCGGCA GCCCTACAGC CTGCAAAAAA CCTGGGCGGC GCTGATTGCA
GCGATGATTT TACTGATCCC GGCCAACCTG ATGCCGATCT CCATCATTTA CGCCAATGGC
GCACGAATGG AAGACACCAT CTTCTCCGGA GTGGTCTCAC TGGCGACCTC CGGCAATGTA
CCGATCGCCG CCATCGTGTT CATTGCCAGC GTATTGGTGC CCTTTACCAA GGTCATCGTG
CTGATCACCT TGCTGCTGAG TATTCATTTC AAGACCTCGC ACAGCCTGAG AACCCGTATT
CGCCTGCTGC GCCTGGTCAC CTGGATCGGC CGTTGGTCGA TGCTCGATCT GTTTGTTATT
GCTTTAATGA TGTCGCTGGT GAATCGCGAC CAATTGTTAT CTTTTACTAT GGGGCCGGCA
GCCTTTTATT TTGGGTCTGC GGTTATTTTA ACTATTCTTG CCGTAGAGTG GCTGGATAGC
CGATTGATTT GGGATGCACA TGCAACAGGA AACGCCGAAT ACACCGACTG A
|
|---|
| Protein sequence | MMKIHAITGP LSKARHQRCC ECDLLFVLPP LSGKQAAYCP RCDAKVVSGR DWSMTRLTAM
AVTMLLLMPF AFSQPLISIR LLGVRIDASL LEGIWQMSHQ GDPLTASMVA FCTIGAPLTL
ALSLLYLRFG HALGMNLRPV LLMLDRLKEW VMLDIYLIGM AVATIKVKEY ADIQAGSALI
AYLALTLLSI LTLIHVNLEQ LWERYYPQEQ PKGLPTALHI CLSCHFTGYP DQRGRCPRCH
IPMCRRQPYS LQKTWAALIA AMILLIPANL MPISIIYANG ARMEDTIFSG VVSLATSGNV
PIAAIVFIAS VLVPFTKVIV LITLLLSIHF KTSHSLRTRI RLLRLVTWIG RWSMLDLFVI
ALMMSLVNRD QLLSFTMGPA AFYFGSAVIL TILAVEWLDS RLIWDAHATG NAEYTD
|
|---|
| |