| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2113 |
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| Symbol | yebU |
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| ID | 5606269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2306082 |
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| End bp | 2307593 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640937651 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_001478344 |
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| Protein GI | 157370355 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000343432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGGCC CCTACTTTTT TCGGTTTGTG GTAAACTCCC GCCCTTATTT TGATAGCTGC
CAGAGAGTTC ACCCCGTGGC CAAACCCGCC TGCGTTTTTT TGCCGCCCGC CTTTCTCGAG
GCGACGCGCG CCATCATGCC CGCCGACCTG TCGATGGACG ATTTCATTGC CGCCTGCCAG
CGCCCGCTGC GCCGCAGTCT GCGAGTTAAT ACGCTAAAAA TCAGCGTCAC CGACTTTCTG
ACGCTGGTGC AGGATTATGA CTGGCGTCTG GAGCCCATCC CCTGGTGCGC GGAAGGCTTT
TGGATCGAAC GCGGGGACGA AGAACTGCGG CTGGGCAGCG CTGCTGAACA CCTGAGCGGC
CTGTTTTACA TTCAGGAGGC CAGCTCAATG CTGCCGGTCA GTGCGCTGTT CGCCGGGGCC
GAAGCACCAA GCCGGGTACT GGACGTAGCG GCCGCACCAG GATCCAAAAC CACCCAGATT
GCGGCGCTGA TGAACAATCA GGGCGGCATT GTCGCCAATG AATACTCCGC CAGCCGGGTC
AAGGTATTGC ACGCCAACAT TAGCCGCTGT GGCGTGAAGA ATGTGGCCCT GACCCACTTC
GACGGCCGGG TGTTCGGCGC TGCGTTGCCG GAAAGCTTCG ACGCCATCTT GCTCGATGCG
CCCTGCTCTG GCGAAGGTGT GGTGCGTAAG GATCCGGACG CCATGAGTAA CTGGTCACCG
GAAAGCGTGA CCGCCATTGC CGACACCCAG CGTGAACTGA TCGACAGTGC CTTCCATGCT
CTGGCGCCCG GCGGCGTGAT GGTTTACTCC ACCTGCACGC TCAACGCGCA GGAAAATCAG
CAGATCGTCA ACGGGCTGCT GGCGACCTAC GGCGACGCGG TCAGCATTGA ACCGCTGGGT
GACTTGTTCC CCGGTGCTAA ACAGGCGTTA ACCGCCGAAG GTTTTCTGCA CGTGTTCCCG
CAAATCTACG ATAGCGAAGG CTTCTTCGTG GCACGGTTGC GCAAGCACCA CTCCGTCCCC
CCGCTGGCAA AGCCAAGCTA TAAGCTGGGC AAATTCCCGT TTACCCCGCT TTCCGGTAAG
GATTCGGCCG AAATCGCTCA GGCAGCAGCG GCCTCCGGAT TAGCCTGGGA TAAAACCAGC
CGTCTGTGGG CTCGCGATAA AGAAATCTGG CTGTTCCCTG CCGAGCTGGA AGCGCTGGTT
AATAAAATTC GCTTCTCGCG TATCGGGCTG AAACTGGCCG AGCGTTTCAC CAAAGGCTAC
CGCTGGCAGC ATGAAGCGGT TATCGCACTG GCGGTTGCCG ACGGCAAACA GCGTTTTGAA
CTGGACGCCA CGCTGGCGCA GGAGTGGTTC CACGGCCGTG ACCTCTACCC GGAGCCACCG
CCGCAGACCG ATGAATGTAT TGTCACCTAC CAGCAACAGC CGCTGGGTAT CGCCAAACGC
ATCGGCAGCC GGATCAAAAA CAACCTGCCG CGCGAACTGG TTCGTGACGG CGTGTTGGAT
TTCCATCAAT AA
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| Protein sequence | MPGPYFFRFV VNSRPYFDSC QRVHPVAKPA CVFLPPAFLE ATRAIMPADL SMDDFIAACQ
RPLRRSLRVN TLKISVTDFL TLVQDYDWRL EPIPWCAEGF WIERGDEELR LGSAAEHLSG
LFYIQEASSM LPVSALFAGA EAPSRVLDVA AAPGSKTTQI AALMNNQGGI VANEYSASRV
KVLHANISRC GVKNVALTHF DGRVFGAALP ESFDAILLDA PCSGEGVVRK DPDAMSNWSP
ESVTAIADTQ RELIDSAFHA LAPGGVMVYS TCTLNAQENQ QIVNGLLATY GDAVSIEPLG
DLFPGAKQAL TAEGFLHVFP QIYDSEGFFV ARLRKHHSVP PLAKPSYKLG KFPFTPLSGK
DSAEIAQAAA ASGLAWDKTS RLWARDKEIW LFPAELEALV NKIRFSRIGL KLAERFTKGY
RWQHEAVIAL AVADGKQRFE LDATLAQEWF HGRDLYPEPP PQTDECIVTY QQQPLGIAKR
IGSRIKNNLP RELVRDGVLD FHQ
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