Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2112 |
Symbol | |
ID | 5606268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2305265 |
End bp | 2305804 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640937650 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001478343 |
Protein GI | 157370354 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00656518 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA TTCTGATGGC ATTGACCTCG GCAGCCACCT TGCTGTGCGC GAGTGGTGCA GCCAACGCAG CTGGCACTAT TCAGGGTAAC CTCGGGGTAA CCTTAACCAT TGGCGCAGGT TGCGTGGTCG GCGGCGGTAA CAGCGCGGGG AGCGCCAACG ACTTTGGCTC TATCGACTTC GGTACCTATT CTTCCCTGTC CAACATTATC GACGCCAGCG CAACCGGTTC CGGCGGTGCG GGAACTTTGT CGCTGACCTG TACCACAGGG ACCGCCTACA CCGTGGCATT AAACAACGGT TTGCATGTAG GTGCCGGTAA CCAGCGCCAA ATGGCCAGCA CGGCGGGTTC CTTGATCAAG TACAACCTCT ACCAGGATCA GGCCCGCGCT ACCGCCTGGT CCAGCGGTGC CAACGCCCTG ACCGGCACCG GTACCGGTGC AGCGGTTCCG TTGATTGTCT ATGCCCGTGT CCCGGCGGCG GCCACCACGC CCGATCCTGA TACCTACAAC GATACGGTGA CCATGACGGT AACCTGGTAA
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Protein sequence | MKKILMALTS AATLLCASGA ANAAGTIQGN LGVTLTIGAG CVVGGGNSAG SANDFGSIDF GTYSSLSNII DASATGSGGA GTLSLTCTTG TAYTVALNNG LHVGAGNQRQ MASTAGSLIK YNLYQDQARA TAWSSGANAL TGTGTGAAVP LIVYARVPAA ATTPDPDTYN DTVTMTVTW
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