| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2108 |
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| Symbol | |
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| ID | 5606280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2300917 |
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| End bp | 2303265 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640937646 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001478339 |
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| Protein GI | 157370350 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00424267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGACA CCACTTTGTA CCTGGAGCCG GTGGTCAATG GGCGTCAAAC CGGAAAAGTA
GTACCGGTCA ACTACCGAGG CGGCCACTAT TACCTTACGC CGCAGCAGTT GCTCGATGCA
GGCCTGCCGG TGGCGGATAA ACAGGCGAAA GAAATTGCGG TCGACCAATT GGAGAAGGTT
GACGTCACCT ACAGTGGCGA TACTCAGCAG TTGATGATCA ACGTCCCCAA CGACTGGTTA
CCCAATCAGA AATTCAACGC TCAAAACCCG TTGGATCGCC TGCCGGCACA AAGCAGCCTC
GGTCTGCTGT TCAATTATGA TATTTATGCC AGCCAAAGCA GCGCCAACGG CCAGCCGGGC
TATCTTTCCG CCTGGAGTGA ACAGCGGCTG TTCGACGGCT TTGGCGTAGT GTCCAACACC
GGTATTTTCC GCGGCAGCTT TAACGACGGC GCCAACAACA GTGACCAGGG CAACCGCTAT
ATCCGCTACG ACAGCCAGTG GCGCTATAAC GATGATGAAC GCCTGCTCAG CTATACCGCC
GGCGATCTGG CCACCGGCGC TCTGACCTGG AGCAGCTCGG TGCGTATCGG CGGCGTCCAG
CTGGCACGTA ACTTTGCCTC GCGCCCGGAT CTGATCACCT ATCCGCTGCC GCAGTTTTCC
GGCCAGGCGG CGCTGCCCAG CAGCGTCGAT CTGTATATCA ACAGCTATAA AAACAGCAGC
ACCAGCGTTA ACCCTGGCCC TTTTACCCTC AATACCGTGC CCTACATTAA CGGAGCCGGG
CAGGCCACGG TGGTGACTAC CGACGCGCTG GGCCGCCAGG TCAGTACCGT GGTGCCGTTT
TATGTCGCCA GTAATCTGTT GCAGGCCGGC ATGAGCGATT TCAGCCTGTC CAGCGGCGCG
TTACGGCGCA ATTATGGTAT TAATTCAGCG GATTATGGAC AGTGGGTGGC CAGTGGCAGC
GGGCGTTACG GCGTCACGGA CTGGTTAACC CTGGAAGGTC GAGCCGAAGG AGCCGCAGAG
TTGGCGGTGG GCGGCGCAGG GGCCAATATT CGTGTTGGTC AGTGGGGGGT ATTCAATGCC
TCTTACAGCT ACAGTCAGGC CGGCGAAAAT GCCTTTAACG ATTATCAACC TTCGCAGCAG
CGCAACTACT ACGATCCGCT GACCGGTCAA CCCATCCCTC AGCCCGACAC CCAGCCGGTC
TATCAGTACA GCACCGACCA TGGCGATCAG AGCAGCATCG GCTACACCTA CAGCAATCGC
TATTACAGCC TGAATGCCCA GCGCATTCTG CGCAGTGCGG GCTTTGGCGA TATTTCGGTG
TATAAAAGTG ACTATCGCCT GAGCCGCCGT ACCGATCAAC TGACCGGCAG TATTGGTCTG
AACCGATTCG GTAGCATCGG TGCGGGCTAT TTCGATGTAC GCGATGCCAT TGGCCTGCGC
ACTCGCCTGG TTAACTTCTC TTACAGCATT TCACTGTGGC GCAATACCAG CCTGTATGCG
TCAGTGAACC GCGAAATCGG CAGCAGCGGC TACAGCGCCC AGCTGCAACT GTCTATCCCC
TTCGACAGTT GGGGTACCGC CAGCGTCAGC GCCTCTCGTG ACAATGAAAA CCGCTGGAAC
CAACGCGTCA GCTACAGCCG CGCCGCGCCG ACCGACGGCG GTTTGGGCTG GAACCTGGCC
TATGCCGATG GGCAAAGCAG CGAAAGCTAC ACCCAGGCCG ATATCACCTG GCGCACCCGC
CTGCTCGAAG CCCGCGGCGG GATGTACGGC AACAGCGATG ATTACACCCG CTGGGGCGAA
GTGAGTGGTT CGCTGGTGGC GATGCAAGGC GATCTGTACG CCACCAACAC CATCAACGAT
GCTTTTGCAT TGATCTCTAC CGACGGCTAT CCGGACATTC CGGTACGCTA TGAGAATCAG
TTAATCGGCG TGACCAACGC CAAAGGCTAT CTGCTGGTGC CGACCGTCAC CTCCTATTAC
CACGCCAAAT TCCAAATCGA TCCGCTCAAT CTGCCGGCGG ACGTGGCGGT TCCCAGCGTG
GAGAAAACCG TGGCGATCCG CGATCACAGC GGCTTCCTGG TCGATTTCCC TGTCCAGCAA
ATCTCCGCCG CCGACATCAA ACTGGTCGAC GCACAGGGGA AACCGCTGGC CAACGGCAGC
GAAGTCGCGG TTATCGGTAG CAAGCAGCAA AGCTACGTCG GTTGGGATGG CATGGTTTAT
GTGGATCCGG TGCAACGGCA AAACCGCCTG AGCGTCATTC CGGCCGACGG CAGCGCCCCC
TGTCAGGCGC AATTTAGCCT GACCAAAACC CAGGGGATCC AAAGCATCGG CCCCATTGTT
TGCCAGTAA
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| Protein sequence | MPDTTLYLEP VVNGRQTGKV VPVNYRGGHY YLTPQQLLDA GLPVADKQAK EIAVDQLEKV
DVTYSGDTQQ LMINVPNDWL PNQKFNAQNP LDRLPAQSSL GLLFNYDIYA SQSSANGQPG
YLSAWSEQRL FDGFGVVSNT GIFRGSFNDG ANNSDQGNRY IRYDSQWRYN DDERLLSYTA
GDLATGALTW SSSVRIGGVQ LARNFASRPD LITYPLPQFS GQAALPSSVD LYINSYKNSS
TSVNPGPFTL NTVPYINGAG QATVVTTDAL GRQVSTVVPF YVASNLLQAG MSDFSLSSGA
LRRNYGINSA DYGQWVASGS GRYGVTDWLT LEGRAEGAAE LAVGGAGANI RVGQWGVFNA
SYSYSQAGEN AFNDYQPSQQ RNYYDPLTGQ PIPQPDTQPV YQYSTDHGDQ SSIGYTYSNR
YYSLNAQRIL RSAGFGDISV YKSDYRLSRR TDQLTGSIGL NRFGSIGAGY FDVRDAIGLR
TRLVNFSYSI SLWRNTSLYA SVNREIGSSG YSAQLQLSIP FDSWGTASVS ASRDNENRWN
QRVSYSRAAP TDGGLGWNLA YADGQSSESY TQADITWRTR LLEARGGMYG NSDDYTRWGE
VSGSLVAMQG DLYATNTIND AFALISTDGY PDIPVRYENQ LIGVTNAKGY LLVPTVTSYY
HAKFQIDPLN LPADVAVPSV EKTVAIRDHS GFLVDFPVQQ ISAADIKLVD AQGKPLANGS
EVAVIGSKQQ SYVGWDGMVY VDPVQRQNRL SVIPADGSAP CQAQFSLTKT QGIQSIGPIV
CQ
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