Gene Spro_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2088 
Symbol 
ID5606531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2283735 
End bp2284271 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID640937626 
Producthypothetical protein 
Protein accessionYP_001478319 
Protein GI157370330 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.9046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATA GCAAGCTAAC CATATATCTC TTCGCGGGCT ACGCCGCCCC CTTTGCACTG 
GAAAACACTG TGATGAAACG TCTCTCTGCC CCCCTCTGCG CCCTGGCCTT ACTGGCATTA
GCCAACAACG CCACGGCAGC CCAAGCTCCG CAACTCAATA ACGCCCAGGC AAATCAGGTG
ATCGCCAGCG TGCAGTCAAC GCTGAAAACG CAAAACAGCT TCGGCTGCGT GGCAGTGGTC
GACAGCAGTG GCACGTTGCT CGCCTTCCAA CGTTTCGACG GTTCCCCGTT GGGTTGCGTC
GATGCCTCCA TCGGTAAAGC GCGGGCCTCC GCGCTGTATC GTGCCCCCAC GTTGAAATTT
ATGCAGCGCC TGCAAAACGG TGAAATCACC GTACTGAGCA TTCCGCACGT GGTGGCGCTG
GGCGGCGGTT ATCCACTGAC GCTGAACGGC GAAGTGGTTG GTGCTGTCGG TGTCAGCACG
CCAAAACAGG AAATCGACAA CCAGGCATCG CAAACCGCCG CCGGCGCGTT GAAATAA
 
Protein sequence
MIHSKLTIYL FAGYAAPFAL ENTVMKRLSA PLCALALLAL ANNATAAQAP QLNNAQANQV 
IASVQSTLKT QNSFGCVAVV DSSGTLLAFQ RFDGSPLGCV DASIGKARAS ALYRAPTLKF
MQRLQNGEIT VLSIPHVVAL GGGYPLTLNG EVVGAVGVST PKQEIDNQAS QTAAGALK