Gene Spro_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2086 
Symbol 
ID5606535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2281570 
End bp2283186 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content60% 
IMG OID640937624 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001478317 
Protein GI157370328 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.879766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CATTAAATGC CGATGTTGTG GTAATTGGCG CCGGTATCGC CGGTTCGTTG 
GCGGCATTGA AAATGGTGCA GGCCGGCGCT TCGGTGCTGA TGCTGGAGTC CGGCCCGGAA
ATCAAACGCG ATAAGGCAGT CGAGTTGTTT CGCAACTCGC CGTTCAAAGG CGATTTCACC
GAACCCTTCC CGCCCGAACC CTGGGCACCG CAGCCGAAAT TTATTCCGAC GGACAACAAC
TATCTGATCC AGAAAGGCCC GGATCCGTAC CGCGCCCAAT ATCTGCGCGG CGTCGGCGGC
ACCACCTGGC ACTGGGCCGG ACAGGCTTTT CGCCTGCTGC CAAACGACAT GCGGATGAAA
ACCCTGTACG GCGTCGGCCG CGACTGGCCA ATCGGTTATG AACAGTTGGA GCCTTATTAT
TGCGAGGCGG AGTACCAGAT GGGGGTGTCC GGCGACAGCG AACTGGACTC GCCGCGCTCC
CGCCCCTACC CGCTGCCCGG CATCCCTCTG CCTTACGGTT TTGAACGCCT TAAGCAACGC
ATCGCCGGGT TGGGTTACGA GGTAGGTATC GGCCCGCAGG CGCGTAACAG CGTGCCCTAT
GACGGCCGCC CGGCCTGCTG CGGCAATAAC AACTGCATGC CGGTCTGCCC GATCGACGCG
CAGTATCACG GCGGCATTTC GGCGAATAAA GCCCTGGCGG CCGGGGCGCG TATTATCGCC
AATGCGGTCG TGCACCGCAT CGAGGCCAAT GAACAGGGAC AGATCGTGGC GGTGCATTAT
CTCGACCGCA ACAAGGTCAG CCACCGCGTT ACCGGCAAGC GCTTCGTGCT CACCGCCAAC
GGTATCGAAA GCCCAAAAAT TCTGCTGATT TCCACCAGTG AACGCTACCC GAACGGCATC
GCCAACGGCT CCGGTATGGT GGGCCGCAAC CTGATGGATC ACCCCGGTAG CTCGGTGGAG
TTTTACGCCG ACGAGCCGGT CTGGTTCGGC CGCGGCCCGA TGCGCCCCGG CAGCATCAAC
AACCTGCGCG ACGGCGCCTT CCGGGCCGAA CGTTCAGCGC TGCGCGTTGA CGTGTCCAAT
ACCTCGCCGG TGCGTTACCT CACCGAGAGG CTGATCCGCC AGGGTTACTA CGGCAAAGCG
CTGAACGACA AACTGGCATT CCAGTCCGAA CGCTATGTGC AGCTGAAATG CCTGCTGGAA
ATGCTGCCGG AACCGGAAAA CCGCGTCCAG CTGAGTCAAA CCGAGAAGGA CGCCTGGGGC
ATTCCCAAAC TGGAGGTGTA CTACAAATTC CCGGAGTATG TTCACCGCGG TTATGACCAA
TCCATGCTCG ATTTTCAGCG GATCGTCAAG CAGATGGGCG GCAGCGAAGC GATTTACAGC
AAACGTGGCC TGTATGACAA CAACCAACAT ATTACCGGCA CCATGATCAT GGGCCGTGAC
GGCAGCGACT CGGTAGTGGA CGGCGACTGC CGCAGCCACG ATCACCCTAA TTTGTTTATC
GCCGGTACCG GCGTGATGCC CTCCGCGTCG ACCGTTAACT CCACCCTGAC CGGCGTCGCG
CTGGCGCTGC ATATGGCCGA TCGGGTGTTA GACAGCCTGA AAGGAGGCAT GGCGTGA
 
Protein sequence
MSDSLNADVV VIGAGIAGSL AALKMVQAGA SVLMLESGPE IKRDKAVELF RNSPFKGDFT 
EPFPPEPWAP QPKFIPTDNN YLIQKGPDPY RAQYLRGVGG TTWHWAGQAF RLLPNDMRMK
TLYGVGRDWP IGYEQLEPYY CEAEYQMGVS GDSELDSPRS RPYPLPGIPL PYGFERLKQR
IAGLGYEVGI GPQARNSVPY DGRPACCGNN NCMPVCPIDA QYHGGISANK ALAAGARIIA
NAVVHRIEAN EQGQIVAVHY LDRNKVSHRV TGKRFVLTAN GIESPKILLI STSERYPNGI
ANGSGMVGRN LMDHPGSSVE FYADEPVWFG RGPMRPGSIN NLRDGAFRAE RSALRVDVSN
TSPVRYLTER LIRQGYYGKA LNDKLAFQSE RYVQLKCLLE MLPEPENRVQ LSQTEKDAWG
IPKLEVYYKF PEYVHRGYDQ SMLDFQRIVK QMGGSEAIYS KRGLYDNNQH ITGTMIMGRD
GSDSVVDGDC RSHDHPNLFI AGTGVMPSAS TVNSTLTGVA LALHMADRVL DSLKGGMA