Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2086 |
Symbol | |
ID | 5606535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2281570 |
End bp | 2283186 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640937624 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001478317 |
Protein GI | 157370328 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.879766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CATTAAATGC CGATGTTGTG GTAATTGGCG CCGGTATCGC CGGTTCGTTG GCGGCATTGA AAATGGTGCA GGCCGGCGCT TCGGTGCTGA TGCTGGAGTC CGGCCCGGAA ATCAAACGCG ATAAGGCAGT CGAGTTGTTT CGCAACTCGC CGTTCAAAGG CGATTTCACC GAACCCTTCC CGCCCGAACC CTGGGCACCG CAGCCGAAAT TTATTCCGAC GGACAACAAC TATCTGATCC AGAAAGGCCC GGATCCGTAC CGCGCCCAAT ATCTGCGCGG CGTCGGCGGC ACCACCTGGC ACTGGGCCGG ACAGGCTTTT CGCCTGCTGC CAAACGACAT GCGGATGAAA ACCCTGTACG GCGTCGGCCG CGACTGGCCA ATCGGTTATG AACAGTTGGA GCCTTATTAT TGCGAGGCGG AGTACCAGAT GGGGGTGTCC GGCGACAGCG AACTGGACTC GCCGCGCTCC CGCCCCTACC CGCTGCCCGG CATCCCTCTG CCTTACGGTT TTGAACGCCT TAAGCAACGC ATCGCCGGGT TGGGTTACGA GGTAGGTATC GGCCCGCAGG CGCGTAACAG CGTGCCCTAT GACGGCCGCC CGGCCTGCTG CGGCAATAAC AACTGCATGC CGGTCTGCCC GATCGACGCG CAGTATCACG GCGGCATTTC GGCGAATAAA GCCCTGGCGG CCGGGGCGCG TATTATCGCC AATGCGGTCG TGCACCGCAT CGAGGCCAAT GAACAGGGAC AGATCGTGGC GGTGCATTAT CTCGACCGCA ACAAGGTCAG CCACCGCGTT ACCGGCAAGC GCTTCGTGCT CACCGCCAAC GGTATCGAAA GCCCAAAAAT TCTGCTGATT TCCACCAGTG AACGCTACCC GAACGGCATC GCCAACGGCT CCGGTATGGT GGGCCGCAAC CTGATGGATC ACCCCGGTAG CTCGGTGGAG TTTTACGCCG ACGAGCCGGT CTGGTTCGGC CGCGGCCCGA TGCGCCCCGG CAGCATCAAC AACCTGCGCG ACGGCGCCTT CCGGGCCGAA CGTTCAGCGC TGCGCGTTGA CGTGTCCAAT ACCTCGCCGG TGCGTTACCT CACCGAGAGG CTGATCCGCC AGGGTTACTA CGGCAAAGCG CTGAACGACA AACTGGCATT CCAGTCCGAA CGCTATGTGC AGCTGAAATG CCTGCTGGAA ATGCTGCCGG AACCGGAAAA CCGCGTCCAG CTGAGTCAAA CCGAGAAGGA CGCCTGGGGC ATTCCCAAAC TGGAGGTGTA CTACAAATTC CCGGAGTATG TTCACCGCGG TTATGACCAA TCCATGCTCG ATTTTCAGCG GATCGTCAAG CAGATGGGCG GCAGCGAAGC GATTTACAGC AAACGTGGCC TGTATGACAA CAACCAACAT ATTACCGGCA CCATGATCAT GGGCCGTGAC GGCAGCGACT CGGTAGTGGA CGGCGACTGC CGCAGCCACG ATCACCCTAA TTTGTTTATC GCCGGTACCG GCGTGATGCC CTCCGCGTCG ACCGTTAACT CCACCCTGAC CGGCGTCGCG CTGGCGCTGC ATATGGCCGA TCGGGTGTTA GACAGCCTGA AAGGAGGCAT GGCGTGA
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Protein sequence | MSDSLNADVV VIGAGIAGSL AALKMVQAGA SVLMLESGPE IKRDKAVELF RNSPFKGDFT EPFPPEPWAP QPKFIPTDNN YLIQKGPDPY RAQYLRGVGG TTWHWAGQAF RLLPNDMRMK TLYGVGRDWP IGYEQLEPYY CEAEYQMGVS GDSELDSPRS RPYPLPGIPL PYGFERLKQR IAGLGYEVGI GPQARNSVPY DGRPACCGNN NCMPVCPIDA QYHGGISANK ALAAGARIIA NAVVHRIEAN EQGQIVAVHY LDRNKVSHRV TGKRFVLTAN GIESPKILLI STSERYPNGI ANGSGMVGRN LMDHPGSSVE FYADEPVWFG RGPMRPGSIN NLRDGAFRAE RSALRVDVSN TSPVRYLTER LIRQGYYGKA LNDKLAFQSE RYVQLKCLLE MLPEPENRVQ LSQTEKDAWG IPKLEVYYKF PEYVHRGYDQ SMLDFQRIVK QMGGSEAIYS KRGLYDNNQH ITGTMIMGRD GSDSVVDGDC RSHDHPNLFI AGTGVMPSAS TVNSTLTGVA LALHMADRVL DSLKGGMA
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