Gene Spro_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2078 
Symbol 
ID5606598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2271788 
End bp2272543 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID640937616 
Producthistidine utilization repressor 
Protein accessionYP_001478309 
Protein GI157370320 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTGATC AACAGACCGT GCTGCAACTG GCTGCTGCCA TGAGCGATAC CCCCGCCCCG 
ATCTATCAAC GGGTCAAGCA GGCGATCGTA AACCAAATCC GTGCCGGCCA CTGGTTACCG
CACCAACGCG TCCCCTCGGA AAGTGAACTG GTGGCCGAGC TTGGCGTCAG TCGCATGACC
ATCAACCGTG CGCTGCGCGA ACTGACCACC GAAGGTTTCC TGATCCGCAT GCAGGGCGTG
GGGACCTTTG TCGCCGAAGC CAAAGCGCAC ACCGCCCTGC TGGAAGTGCA TAACATCGCC
GACGAAATCG CCGCCCGTGG CCACCGCCAC AGCAGCAAAA TCCTGCAGCT AAAGGCCCGT
CCGGCCAGTG AAGAAGAAGC GCTGGCGCTA GGCATTCAAC CCGGCCAGCA GCTGTTCTAT
TCGCAAATCG TGCATTATGA AAACGACCTG CCGGTGCAGG TGGAAGACCG CTGCGTCAAT
CCTTTGATCG CCCCCGACTA CATGCTGCAG GATTTCGATC GCGTCACGCC TTATATCTAC
CTGACGCAGG CCGCCCCGCT GACCGCAGGC GAGCACATCG TGGAAGCCGT GGTGCCAACC
CACCAGGAGC GCGAACTGCT GCAACTGGAA GACCACGAAC CCGGCCTGCT GATCCATCGC
CGCACCTGGT CCGGCAAAAC CGTGGTGACC TCGGCGCGCC TGCTGTACCC CGGCAGCCGC
TATCAACTGT TTGGCCGTTT CACCAGCGAA GTCTGA
 
Protein sequence
MVDQQTVLQL AAAMSDTPAP IYQRVKQAIV NQIRAGHWLP HQRVPSESEL VAELGVSRMT 
INRALRELTT EGFLIRMQGV GTFVAEAKAH TALLEVHNIA DEIAARGHRH SSKILQLKAR
PASEEEALAL GIQPGQQLFY SQIVHYENDL PVQVEDRCVN PLIAPDYMLQ DFDRVTPYIY
LTQAAPLTAG EHIVEAVVPT HQERELLQLE DHEPGLLIHR RTWSGKTVVT SARLLYPGSR
YQLFGRFTSE V