Gene Spro_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2016 
Symbol 
ID5607452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2210144 
End bp2210860 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content59% 
IMG OID640937554 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001478247 
Protein GI157370258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.117886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC AGCACAACCC TACGCCGCCC CGGCGTAACT TTCTCAAAAA GACCCTGGCG 
TTAATCCCGT TGGCTGCCGC CGGCAGCAGC ATTCTGGCAC TGGATGCCAA GGCCGCCCCC
GCTGCCGGCG TAGCGGATCA CTATGTTCCG GTCTATTTCA ACGCCGACGA ATGGCGTTTT
CTGCTGGCGG CCTGCGATCG GCTGATCCCC ACAGACGATA ACGGCCCCGG CGCGGTCGAT
CAGGGCGTAC CGGTGTTTAT CGATCGTCAA ATGGAAACCC CTTACGGCCA CGGCGGCTTG
TGGTATATGC ATCCGCCGTT CGTTCCCTCC CCGCCGCAAC TGGGTTATCA GTCCAAGCTG
ACGCCGCGCG AAACCTACCG AATCGGCATT CACGAAATCA ATGCGCACTG TCAGCAACAG
TTCCAAAAGG CATTTGCCGA TCTCGAACAC GCTGAGCAGG AACAACTGCT GGCGGCGCTG
GAGCACGGCC AGTTGGATTC TGAAGACTTG CCCGGCAAGG CATTTTTTGA CCAGTTACTC
ACCAACACCA CGGAGGGCTA TCTGGCCGAT CCGCTGCACG GCGGCAACCA GACGCTGGCG
TCATGGAAAA TGATCGGTTT CCCCGGCGCG CGTGCGGATT ACACCGACTG GGTCAATCGT
CCCAATCAGC CTTATCCCCT CGGCCCGGTC AGTATCTCAA GCAAAAGGAA TGCATAA
 
Protein sequence
MSQQHNPTPP RRNFLKKTLA LIPLAAAGSS ILALDAKAAP AAGVADHYVP VYFNADEWRF 
LLAACDRLIP TDDNGPGAVD QGVPVFIDRQ METPYGHGGL WYMHPPFVPS PPQLGYQSKL
TPRETYRIGI HEINAHCQQQ FQKAFADLEH AEQEQLLAAL EHGQLDSEDL PGKAFFDQLL
TNTTEGYLAD PLHGGNQTLA SWKMIGFPGA RADYTDWVNR PNQPYPLGPV SISSKRNA