Gene Spro_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2012 
Symbol 
ID5603984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2204606 
End bp2206063 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content55% 
IMG OID640937550 
Productsensor protein PhoQ 
Protein accessionYP_001478243 
Protein GI157370254 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0783662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA AAAATAAAAA GCCTTTTTCC CTACGAGCCC GCTTTTTGAT GGCTACCGCC 
GGGGTGATCC TGGCGCTGTC GCTGTCCTAT GGTCTGGTCG CGGTCGTGGG TTATATCGTC
AGCTTCGACA AAACCGCCTT CCGCCTGCTG CGTGGCGAAA GCAACCTGTT CTTCAGCCTG
GCCCAGTGGA AAGACAACAA GCTCACCATC GCCATTCCGC CCGATATCGA TCTCAACTTC
CCTACCCTGG TGTTTATTTA CGACGATAAG GGCAAGCTGC TGTGGAGCCA GCGCCAGGTA
CCGGAACTGG AAAAACGGAT CAACAAAGAG TGGCTGGAAG AGTCCGGTTT CTACGAAATT
GACACCGATA CCCGCATCAG TAGCGAAGTC CTGGGGAACA ACCCCAAGGC GCAAGATCAA
CTCAAAGACT ATGACGACAA CGACCAGAAT GCGCTGACCC ACTCCGTGGC GGTCAACACC
TACGCGGCGA CCGCAAGATT GCCGGCGCTA AGCATCGTGG TGGTCGACAC TATCCCGCAA
GAGCTTCAGC GTTCAGACGT CGTCTGGGAA TGGTTCAGCT ATGTGTTGCT GGCTAACCTG
CTGTTGGTGG TGCCCCTGCT GTGGCTGGCG GCCTATTGGA GCCTGCGACC GATCCAGGCG
TTGGTGAATC AGGTCGGCGA ACTGGAAAAC GGTGAGCGAG AACAACTCGA TGAGAACCCC
CCCAGCGAAC TGCGCGGGCT GGTACGCAAT CTGAATATTC TGGTTCGCAA CGAACGCCAG
CGCTATACCA AATACCGCAC CACGCTTTCC GATCTGACCC ACAGTCTGAA AACCCCGCTG
GCGGTACTGC AAACCACATT GCGCTCACTG CGCACCGGCA AGCAAACCAC CATTGAGGAA
GTCGAGCCGA TCATGCTGGA TCAGATCGGA CGTATCTCTC AGCAAATTGG CTACTACCTG
CACCGCGCCA GCATCAACTC CGGGCAAACG GTGCTGACAC GCGAGATCCA TTCGGTACCG
GCCCTGCTGG ACAGCCTGAC GGTGGCGCTG AACAAGGTAT ATCAGCGCAA AGGCGTGGTG
ATCACGCTGG ATATCTCGCC GGAAGTAACC TTTATGGGTG AAAAAAACGA CTTTATGGAA
GTGATGGGCA ACGTACTTGA AAATGCCTGT AAGTACTGCC TGGAATTCGT TGAAATCACC
TCCCTCCACT CCGATAAATA TCTCACCATC GTCATCGATG ACGACGGCCC GGGTATTCCG
GAAAGCAAAC GCGAGTTGAT TTTCCAGCGC GGCCAGCGGG TAGACACTTT GCGCCCCGGT
CAGGGCTTGG GATTATCGGT AGCAGCGGAG ATTATTGAGC AGTACGAGGG CTCCATTACC
ATCAGTGACA GCCCGCTGGG CGGCGCACGT ATGCAGGTCA CTTTCGCTCG TCAGCACGAC
TCCCACCATA ACGAGTAA
 
Protein sequence
MFNKNKKPFS LRARFLMATA GVILALSLSY GLVAVVGYIV SFDKTAFRLL RGESNLFFSL 
AQWKDNKLTI AIPPDIDLNF PTLVFIYDDK GKLLWSQRQV PELEKRINKE WLEESGFYEI
DTDTRISSEV LGNNPKAQDQ LKDYDDNDQN ALTHSVAVNT YAATARLPAL SIVVVDTIPQ
ELQRSDVVWE WFSYVLLANL LLVVPLLWLA AYWSLRPIQA LVNQVGELEN GEREQLDENP
PSELRGLVRN LNILVRNERQ RYTKYRTTLS DLTHSLKTPL AVLQTTLRSL RTGKQTTIEE
VEPIMLDQIG RISQQIGYYL HRASINSGQT VLTREIHSVP ALLDSLTVAL NKVYQRKGVV
ITLDISPEVT FMGEKNDFME VMGNVLENAC KYCLEFVEIT SLHSDKYLTI VIDDDGPGIP
ESKRELIFQR GQRVDTLRPG QGLGLSVAAE IIEQYEGSIT ISDSPLGGAR MQVTFARQHD
SHHNE