Gene Spro_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1993 
Symbol 
ID5603186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2180714 
End bp2181523 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID640937531 
Productputative transcriptional regulator 
Protein accessionYP_001478224 
Protein GI157370235 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.236117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00468418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAGCA TTGCTGATTT TGAATTTAAC ACCGCGCTGC TGAGCGCGGG CGTGATCCTG 
GTTTCGCAGT CCGTGCGGCG TGATTTCCCT ACCGCCGAAG TCGAACGCAA GCTGCAACAG
CTGGTCGATG AAGCACGTGC GGCGATGCCA AAGGATCTCA GCCAGGAACA GCAACTGGAC
GCACTCATTG AACTGTTCTT CAAAACCTGG GGTTTTGGCG GCGCCGGCGG CGTGTATCGT
CTGTCCGACG CGATTTGGCT CGACAAGGTG CTGGAAGGGC GGCAGGGCAC GCCGGTTTCC
CTTGGCACCA TTTTCCTGCA CATCGCTGCG CATCTGGATT TACCGCTGTT GCCGGTGATT
TTCCCCACTC AACTGATCCT GCGGGCAGAC TGGCTGGATG AAGAGATGTG GCTGATCAAT
CCGTTAAACG GTGAGACGCT AAACGAGCAT CAACTGGAAG TGTGGATCAA GGGCAACCTG
GGTCTGGGCG CCGAGTTGGA AGACGATGAT CTCGATGAGT CAGAAAACGT CATGGTGGTG
CGTAAGATGC TCGATACGCT GAAAGCCGCC CTGATGGAAG AACAACAGAT GGAAATGGCG
TTGCGCGCCA GCGAAACGGT GCTGTGTTTC GATCCGGATG ACCCGTACGA AATCCGTGAC
CGTGGGCTGA TTTACGCCCA GTTGGAATGC AACCATATCG CTATTTCCGA TCTCAATTAT
TTTGTCGAAC AGTGTCCTGA AGATCCGGTC AGCGAAGTGA TCAAAGTACA GATCCACTCG
ATTGAACCGA AACAGGTCAC GCTGCATTAA
 
Protein sequence
MSSIADFEFN TALLSAGVIL VSQSVRRDFP TAEVERKLQQ LVDEARAAMP KDLSQEQQLD 
ALIELFFKTW GFGGAGGVYR LSDAIWLDKV LEGRQGTPVS LGTIFLHIAA HLDLPLLPVI
FPTQLILRAD WLDEEMWLIN PLNGETLNEH QLEVWIKGNL GLGAELEDDD LDESENVMVV
RKMLDTLKAA LMEEQQMEMA LRASETVLCF DPDDPYEIRD RGLIYAQLEC NHIAISDLNY
FVEQCPEDPV SEVIKVQIHS IEPKQVTLH